1. Free-form deformation using lower-order B-spline for nonrigid image registration

    Sun, W., Niessen, WJ. & Klein, S., 2014, In : Lecture Notes in Computer Science. 8673, PART 1, p. 194-201 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  2. Free-form deformation using lower-order B-spline for nonrigid image registration.

    Sun, W., Niessen, WJ. & Klein, S., 2014, MICCAI 2014, LNCS 8637, PART1. Golland, P. & et al (eds.). Zwitserland: Springer, p. 194-201 8 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterScientific

  3. Full exploitation of high dimensionality in brain imaging: The JPND working group statement and findings

    Adams, H. H. H., Roshchupkin, G. V., DeCarli, C., Franke, B., Grabe, H. J., Habes, M., Jahanshad, N., Medland, S. E., Niessen, W. & More Authors, 2019, In : Alzheimer's and Dementia: Diagnosis, Assessment and Disease Monitoring. 11, p. 286-290 5 p.

    Research output: Contribution to journalArticleScientificpeer-review

  4. Fully automated carotid plaque segmentation in combined contrast enhanced and B-mode ultrasound

    Akkus, Z., Carvalho, DDB., van den Oord, SCH., Schinkel, AFL., Niessen, WJ., de Jong, N., van der Steen, AFW., Klein, S. & Bosch, JG., 2015, In : Ultrasound in Medicine & Biology. 41, 2, p. 517-531 15 p.

    Research output: Contribution to journalArticleScientificpeer-review

  5. Fully automatic and real-time catheter segmentation in X-ray fluoroscopy

    Ambrosini, P., Ruijters, D., Niessen, W. J., Moelker, A. & van Walsum, T., 2017, Medical Image Computing and Computer Assisted Intervention − MICCAI 2017 - 20th International Conference, Proceedings. Springer, Vol. 10434 LNCS. p. 577-585 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10434 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  6. Fully automatic cardiac segmentation from 3D CTA data: a multiatlas based approach

    Kirisli, HA., Schaap, MA., Klein, S., Neefjes, L., Weustink, AC., van Walsum, T. & Niessen, WJ., 2010, Proc. SPIE. Dawant, BM. & Haynor, DR. (eds.). s.n.: s.n., p. 1-9 9 p. (Proceedings of SPIE- International Society for Optical Engineering; vol. 7623).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  7. Fully automatic nonrigid registration-based local motion estimation for motion-corrected iterative cardiac CT reconstruction

    Isola, AA., Grass, M. & Niessen, WJ., 2010, In : Medical Physics. 37, p. 1093-1109 17 p.

    Research output: Contribution to journalArticleScientificpeer-review

  8. Fusion of fibrous cap thickness and wall shear stress to assess plaque vulnerability in coronary arteries: a pilot study

    Zahnd, G., Schrauwen, J., Karanasos, A., Regar, E., Niessen, W., van Walsum, T. & Gijsen, F., 2016, In : International Journal of Computer Assisted Radiology and Surgery. 11, 10, p. 1779-1790

    Research output: Contribution to journalArticleScientificpeer-review

  9. GENETIC VARIATION UNDERLYING COGNITION AND ITS RELATION WITH NEUROLOGICAL OUTCOMES

    Kool, M. J., Cremers, L. G. M., Heshmatollah, A., Ikram, M. K., Uiterlinden, A. G., van Duijn, C. M., Niessen, W., Vernooij, M. W., Arfan Ikram, M. & Adams, H. H. H., 2018, In : Alzheimer's and Dementia: Translational Research and Clinical Interventions. 14, 7, p. P1652-P1653

    Research output: Contribution to journalArticleScientificpeer-review

  10. GPU accelerated alignment of 3-D CTA with 2-D X-ray data for improved guidance in coronary interventions

    Metz, CT., Schaap, M., Klein, S., Weustink, AC., Mollet, NRA., Schulz, C., Geuns, RJ., Serruys, PW. & Niessen, WJ., 2009, Proceedings of IEEE International Symposium on Biomedical Imaging: Macro to Nano, 2009. s.n. (ed.). s.n., p. 959-962 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  11. Genetic Determinants of Cortical Structure (Thickness, Surface Area and Volumes) among Disease Free Adults in the CHARGE Consortium

    Niessen, W., 2019, (Accepted/In press) In : bioRxiv.

    Research output: Contribution to journalArticleScientific

  12. Genetic architecture of subcortical brain structures in 38,851 individuals

    Satizabal, C. L., Adams, H. H. H., Arfan Ikram, M. & Niessen, W., 2019, In : Nature Genetics. 51, 11, p. 1624-1636

    Research output: Contribution to journalArticleScientificpeer-review

  13. Genetic determination of human facial morphology: links between cleft-lips and normal variation

    Boehringer, S., van der Lijn, F., Liu, F., Gunther, S., Sinigerova, S., Nowak, S., Ludwig, KU., Herberz, R., Klein, S., Hofman, A., Uitterlinden, AG., Niessen, WJ., Breteler, MMB., van der Lugt, A., Wurtz, RP., Nothen, MM., Horsthemke, B., Wieczorek, D., Mangold, E. & Kayser, M., 2011, In : European Journal of Human Genetics. 19, p. 1192-1197 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  14. Genetic risk factors for cerebral small vessel disease in hypertensive patients from a genetically isolated population

    Schuur, M., van Swieten, JC., Schol-Gelok, S., Ikram, MA., Niessen, WJ., Vernooij, M. W., Liu, F., Isaacs, A., Boer, R., de Koning, I., Vrooman, HA., Oostra, BA., van der Lugt, A., Breteler, MMB. & van Duijn, CM., 2011, In : Journal of Neurology, Neurosurgery and Psychiatry. 82, p. 41-44 4 p.

    Research output: Contribution to journalArticleScientificpeer-review

  15. Genetic susceptibility to multiple sclerosis: Brain structure and cognitive function in the general population

    Ikram, M. A., Vernooij, M. W., Roshchupkin, G. V., Hofman, A., van Duijn, C. M., Uitterlinden, A. G., Niessen, W. J., Hintzen, R. Q. & Adams, H. H., 1 Nov 2017, In : Multiple Sclerosis. 23, 13, p. 1697-1706 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  16. Genetic variation underlying cognition and its relation with neurological outcomes and brain imaging

    Knol, M. J., Heshmatollah, A., Cremers, L. G. M., Ikram, M. K., Uitterlinden, A. G., van Duijn, C. M., Niessen, W. J., Vernooij, M. W., Ikram, M. A. & Adams, H. H. H., 2019, In : Aging. 11, 5, p. 1440-1456

    Research output: Contribution to journalArticleScientificpeer-review

  17. Global and focal brain volume in long-term breast cancer survivors exposed to adjuvant chemotherapy

    Koppelmans, V., de Ruiter, MB., van der Lijn, F., Boogerd, W., Seynaeve, C., van der Lugt, A., Vrooman, HA., Niessen, WJ., Breteler, MMB. & Schagen, SB., 2012, In : Breast Cancer Research and Treatment. 132, p. 1099-1106 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  18. Global and focal white matter integrity in breast cancer survivors 20 years after adjuvant chemotherapy

    Koppelmans, V., de Groot, M., de Ruiter, MB., Boogerd, W., Seynaeve, C., Vernooij, MW., Niessen, WJ., Schagen, SB. & Breteler, MMB., 2014, In : Human Brain Mapping. 35, p. 889-899 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  19. Gp-Unet: Lesion detection from weak labels with a 3D regression network

    Dubost, F., Bortsova, G., Adams, H. H., Ikram, M. A., Niessen, W. J., Vernooij, M. W. & de Bruijne, M., 2017, Medical Image Computing and Computer Assisted Intervention − MICCAI 2017 - 20th International Conference, Proceedings. Descoteaux, M. (ed.). Springer, Vol. 10435 LNCS. p. 214-221 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10435 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  20. Gray Matter Age Prediction as a Biomarker for Risk of Dementia

    Wang, J., Knol, M. J., Tiulpin, A., Dubost, F., de Bruijne, M., Vernooij, M. W., Adams, H. H. H., Ikram, M. A., Niessen, W. J. & Roshchupkin, G. V., 15 Oct 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 42, p. 21213-21218

    Research output: Contribution to journalArticleScientificpeer-review

  21. Gray matter heritability in family-based and population-based studies using voxel-based morphometry

    van der Lee, S. J., Roshchupkin, G. V., Adams, H. H., Schmidt, H., Hofer, E., Saba, Y., Schmidt, R., Hofman, A., Amin, N., van Duijn, C. M., Vernooij, M. W., Ikram, M. A. & Niessen, W. J., 1 May 2017, In : Human Brain Mapping. 38, 5, p. 2408-2423 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  22. Groupwise image registration based on a total correlation dissimilarity measure for quantitative MRI and dynamic imaging data

    Guyader, J. M., Huizinga, W., Poot, D. H. J., van Kranenburg, M., Uitterdijk, A., Niessen, W. J. & Klein, S., 2018, In : Scientific Reports. 8, 1, 14 p., 13112.

    Research output: Contribution to journalArticleScientificpeer-review

  23. Groupwise image registration of multimodal head-and-neck images

    Guyader, J-M., Huizinga, W., Fortunati, V., Veenland, JF., Paulides, MM., Niessen, WJ. & Klein, S., 2015, Proceedings of the 12th IEEE International Symposium on Biomedical Imaging. Kova¿evi¿, J. & Angelini, E. (eds.). Piscataway: IEEE Society, p. 730-733 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  24. Groupwise multichannel image registration

    Guyader, J. M., Huizinga, W., Fortunati, V., Poot, D. H. J., Veenland, J. F., Paulides, M. M., Niessen, W. J. & Klein, S., 2019, In : IEEE Journal of Biomedical and Health Informatics. 23, 3, p. 1171-1180 8373696.

    Research output: Contribution to journalArticleScientificpeer-review

  25. HASE: Framework for efficient high-dimensional association analyses

    Roshchupkin, G. V., Adams, H. H. H., Vernooij, M. W., Hofman, A., Van Duijn, C. M., Ikram, M. A. & Niessen, W. J., 26 Oct 2016, In : Scientific Reports. 6, 36076.

    Research output: Contribution to journalArticleScientificpeer-review

  26. Heritability of connectivity and disconnectivity of the brain in a population-based study

    Langen, C. D., Roshchupkin, G., Adams, H. H., De Groot, M., Vos, F., Vernooij, M. W., Ikram, M. A. & Niessen, W. J., 15 Jun 2017, Proceedings of IEEE 14th International Symposium on Biomedical Imaging, ISBI 2017. IEEE, p. 349-353 5 p. 7950535

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  27. Heritability of the shape of subcortical brain structures in the general population

    Roshchupkin, G. V., Gutman, B. A., Vernooij, M. W., Jahanshad, N., Martin, N. G., Hofman, A., McMahon, K. L., Van Der Lee, S. J., van Duijn, C. M., De Zubicaray, G. I., Uitterlinden, A. G., Wright, M. J., Niessen, W. J., Thompson, P. M., Ikram, M. A. & Adams, H. H., 15 Dec 2016, In : Nature Communications. 7, 13738.

    Research output: Contribution to journalArticleScientificpeer-review

  28. Heterogeneity in DCE-MRI parametric maps: a biomarker for treatment response?

    Alic, L., van Vliet, M., Dijke, CF., Eggermont, AMM., Veenland, JF. & Niessen, WJ., 2011, In : Physics in Medicine and Biology. 56, p. 1601-1616 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  29. High Blood Pressure and Cerebral White Matter Lesion Progression in the General Population

    Verhaaren, BFJ., Vernooij, MW., Boer, R. D., Hofman, A., Niessen, WJ., van der Lugt, A. & Ikram, MA., 2013, In : Hypertension. 61, 6, p. 1354-1359 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  30. High-Dimensional Mapping of Cognition to the Brain Using Voxel-Based Morphometry and Subcortical Shape Analysis

    Zonneveld, H. I., Roshchupkin, G. V., Adams, H. H. H., Gutman, B. A., Van Der Lugt, A., Niessen, W., Vernooij, M. W. & Ikram, M. A., 2019, In : Journal of Alzheimer's Disease. 71, 1, p. 141-152

    Research output: Contribution to journalArticleScientificpeer-review

  31. Hippocampal shape is predictive for the development of dementia in a normal, elderly population

    Achterberg, HC., van der Lijn, F., den Heijer, T., Vernooij, MW., Ikram, MA., Niessen, WJ. & Bruijne, M. D., 2014, In : Human Brain Mapping. 35, p. 2359-2371 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  32. Hippocampus segmentation in MR images using atlas registration, voxel classification, and graph cuts

    van der Lijn, F., den Heijer, T., Breteler, MMB. & Niessen, WJ., 2008, In : NeuroImage. 43, 4, p. 708-720 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  33. Histogram-based selective deblurring to improve CT imaging of calcifications

    Rollano-Hijarrubia, E., Niessen, WJ., Weinans, H., van der Lugt, A. & Stokking, R., 2007, In : Investigative Radiology: a journal of clinical and laboratory research. 42, 1, p. 8-22 15 p.

    Research output: Contribution to journalArticleScientificpeer-review

  34. Human computer interaction in segmenting organs at risk for radiotherapy: A pilot study

    Ramkumar, A., Dolz, J., Kirisli, HA., Varga, E., Schimek-Jasch, T., Nestle, U., Massoptier, L., Stappers, PJ., Niessen, WJ. & Song, Y., 2014, Multimodal imaging towards individualized radiotherapy treatments. Massoptier, L. & Song, Y. (eds.). Lille: AQUILAB, p. 69-79 11 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  35. Hydranet: Data augmentation for regression neural networks

    Dubost, F., Bortsova, G., Adams, H., Ikram, M. A., Niessen, W., Vernooij, M. & de Bruijne, M., 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings. Shen, D., Yap, P-T., Liu, T., Peters, T. M., Khan, A., Staib, L. H., Essert, C. & Zhou, S. (eds.). Springer, p. 438-446 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11767 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  36. IT Infrastructure to Support the Secondary Use of Routinely Acquired Clinical Imaging Data for Research

    Leung, KYE., van der Lijn, F., Vrooman, HA., Sturkenboom, MCJM. & Niessen, WJ., 2014, In : NeuroInformatics. p. 1-17 17 p.

    Research output: Contribution to journalArticleScientificpeer-review

  37. IT infrastructure to support the secondary use of routinely acquired clinical imaging data for research

    Leung, KYE., van der Lijn, F., Vrooman, HA., Sturkenboom, MCJM. & Niessen, WJ., 2015, In : NeuroInformatics. 13, 1, p. 65-81 17 p.

    Research output: Contribution to journalArticleScientificpeer-review

  38. Image registration improves human knee cartilage T1 mapping with delayed gadolinium-enhanced MRI of cartilage (dGEMRIC)

    Bron, EE., Tiel, J., Smit, H., Poot, DHJ., Niessen, WJ., Krestin, GP., Weinans, HH., Oei, E., Kotek, G. & Klein, S., 2013, In : European Radiology. 23, 1, p. 246-252 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  39. Image-guided vascular neurosurgery based on three-dimensional rotational angiography - Technical note

    Willems, PWA., van Walsum, T., Woerdeman, PA., van de Kraats, E. B., de Kort, GAP., Niessen, WJ. & van der Sprenkel, JWB., 2007, In : Journal of Neurosurgery. 106, 3, p. 510-506 3 p.

    Research output: Contribution to journalArticleScientificpeer-review

  40. Imaging of Small High-Density Structures in CT: A Phantom Study

    Rollano-Hijarrubia, E., Stokking, R., van der Meer, F. & Niessen, WJ., 2006, In : Academic Radiology. 13, 7, p. 893-908 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  41. Improved tissue segmentation by including an MR acquisition model

    Poot, D., Bruijne, M. D., Vernooij, M. W., Arfan Ikram, M. & Niessen, WJ., 2011, Multimodal Brain Image Analysis. Liu, T., Shen, D., Ibanez, J. & Tao, X. (eds.). Springer, p. 1-8 8 p. (Lecture Notes in Computer Science; vol. 7012).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  42. Improving alignment in Tract-based spatial statistics: Evaluation and optimization of image registration

    de Groot, M., Vernooij, MW., Klein, S., Arfan Ikram, M., Vos, FM., Smith, SM., Niessen, WJ. & Andersson, JLR., 2013, In : NeuroImage. 76, p. 400-411 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  43. Incidence, treatment, and case-fatality of non-traumatic subarachnoid haemorrhage in the Netherlands

    Risselada, R., de Vries, LM., Dippel, DWJ., van Kooten, F., van der Lugt, A., Niessen, WJ., Firouzian, A., Stricker, BH. & Sturkenboom, MCJM., 2011, In : Clinical Neurology and Neurosurgery. 113, 6, p. 483-487 5 p.

    Research output: Contribution to journalArticleScientificpeer-review

  44. Incidental findings on brain MRI in the general population

    Vernooij, M. W., Ikram, MA., Tanghe, HL., Vincent, AJPE., Hofman, A., Krestin, GP., Niessen, WJ., Breteler, MMB. & van der Lugt, A., 2007, In : New England Journal of Medicine. 357, 18, p. 1821-1828 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  45. Independent Multiple Factor Association Analysis for Multiblock Data in Imaging Genetics

    Vilor-Tejedor, N., Ikram, M. A., Roshchupkin, G. V., Cáceres, A., Alemany, S., Vernooij, M. W., Niessen, W. J., van Duijn, C. M., Adams, H. H. & More Authors, 2019, In : NeuroInformatics. 17, 4, p. 583-592 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  46. Influence of image registration on ADC images computed from free-breathing diffusion MRIs of the abdomen

    Guyader, J-M., Bernardin, L., Douglas, NHM., Poot, DHJ., Niessen, WJ. & Klein, S., 2014, In : Progress in Biomedical Optics and Imaging. 9034, p. 1-16 16 p.

    Research output: Contribution to journalConference articleScientificpeer-review

  47. Influence of image registration on apparent diffusion coefficient images computed from fee-breathing diffusion MR images of the abdomen

    Guyader, J-M., Bernardin, L., Douglas, NHM., Poot, DHJ., Niessen, WJ. & Klein, S., 2014, In : Journal of Magnetic Resonance. p. 1-16 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  48. Influence of image registration on apparent diffusion coefficient images computed from free-breathing diffusion MR images of the abdomen

    Guyader, J-M., Bernardin, L., Douglas, NHM., Poot, DHJ., Niessen, WJ. & Klein, S., 2015, In : Journal of Magnetic Resonance Imaging. 42, 2, p. 315-330 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  49. Integrated analysis and visualization of group differences in structural and functional brain connectivity: Applications in typical ageing and schizophrenia

    Langen, CD., White, T., Ikram, MA., Vernooij, MW. & Niessen, WJ., 2015, In : PLoS ONE. 10, 9, art.nr. e0137484, p. 1-25 25 p.

    Research output: Contribution to journalArticleScientificpeer-review

  50. Integrating biological knowledge, novel imaging modalities, and modeling in breast cancer diagnosis

    Karssemeijer, N., Huisman, H., Hawkes, D., Hipwell, J., Bohler, T., Lesniak, J., Tanner, C., Szekely, G., Niessen, WJ. & Hahn, H., 2009, 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro. s.n. (ed.). s.n., p. 386-389 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

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