1. Prevalence and risk factors of cerebral microbleeds: The Rotterdam Scan Study

    Vernooij, M. W., van der Lugt, A., Ikram, MA., Wielopolski, PA., Niessen, WJ., Hofman, A., Krestin, GP. & Breteler, MMB., 2008, In : Neurology. 70, p. 1208-1214 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  2. Quantification of Heterogeneity in Dynamic Contrast Enhanced MRI Data for Tumor Treatment Assessment

    Alic, L., Veenland, J., van Vliet, M., Dijke, CF., Eggermont, AMM. & Niessen, WJ., 2006, From Nano to Macro. Christensen, G., Coatrieux, JL., Fessler, J., Kovacevic, J., Liang, ZP., Meijering, E., Moura, J., Murphy, B., Niessen, WJ., Roux, C., Unser, M. & Wilson, D. (eds.). Piscataway: IEEE Society, p. 944-947 4 p. (International Symposium on Biomedical Imaging. Proceedings; vol. 4).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  3. Quantification of Intracranial Aneurysm Morphodynamics from ECG-gated CT Angiography

    Firouzian, A., Manniesing, R., Metz, CT., Risselada, R., Klein, S., van Kooten, F., Sturkenboom, MCJ., van der Lugt, A. & Niessen, WJ., 2013, In : Academic Radiology. 20, 1, p. 52-58 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  4. Quantification of fibrous cap thickness in intracoronary optical coherence tomography with a contour segmentation method based on dynamic programming

    Zahnd, G., Karanasos, A., van Soest, G., Regar, E., Niessen, W., Gijsen, F. & van Walsum, T., 2015, In : International Journal of Computer Assisted Radiology and Surgery. 10, 9, p. 1383-1394

    Research output: Contribution to journalArticleScientificpeer-review

  5. Quantification of heterogeneity as a biomarker in tumor imaging: a systematic review

    Alic, L., Niessen, WJ. & Veenland, JF., 2014, In : PLoS ONE. 9, 10, p. 1-15 15 p.

    Research output: Contribution to journalArticleScientificpeer-review

  6. Quantification of nonrigid liver deformation in radiofrequency ablation interventions using image registration

    Luu, H. M., Moelker, A., Klein, S., Niessen, W. & Van Walsum, T., 2018, In : Physics in Medicine and Biology. 63, 17, 12 p., 175005.

    Research output: Contribution to journalArticleScientificpeer-review

  7. Quantitative comparison of spot detection methods in live-cell fluorescence microscopy imaging

    Smal, I., Loog, M., Niessen, WJ. & Meijering, E., 2009, IEEE International Symposium on Biomedical Imaging: From Nano to Macro - ISBI 2009. s.n. (ed.). s.n., p. 1178-1181 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  8. Quantitative evaluation of noise reduction and vesselness filters for liver vessel segmentation on abdominal CTA images

    Luu, H. M., Klink, C., Moelker, A., Niessen, W. & Van Walsum, T., 2015, In : Physics in Medicine and Biology. 60, 10, p. 3905-3926

    Research output: Contribution to journalArticleScientificpeer-review

  9. Quantitative evaluation of three calibration methods for 3-D freehand ultrasound

    Rousseau, F., Hellier, P., Letteboer, MM., Niessen, WJ. & Barillot, C., 2006, In : IEEE Transactions on Medical Imaging. 25, 11, p. 1492-1501 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  10. Randomly perturbed b-splines for nonrigid image registration

    Niessen, W. J., Sun, W. & Klein, S., 1 Jul 2017, In : IEEE Transactions on Pattern Analysis and Machine Intelligence. 39, 7, p. 1401-1413 13 p., 7533440.

    Research output: Contribution to journalArticleScientificpeer-review

  11. Randomly perturbed free-form deformation for nonrigid image registration

    Sun, W., Niessen, WJ. & Klein, S., 2014, In : Lecture Notes in Computer Science. 8545, p. 62-71 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  12. Rao-blackwellizezd marginal particle filtering for multiple object tracking in molecular bioimaging

    Smal, I., Draegestein, K., Galjart, N., Niessen, WJ. & Meijering, E., 2007, In : Lecture Notes in Computer Science. p. 110-121 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  13. Region based level set segmentation of the outer wall of the carotid bifurcation in CTA

    Vukadinovic, D., van Walsum, T., Manniesing, R., Rozie, S., van der Lugt, A. & Niessen, WJ., 2011, In : Proceedings of SPIE- International Society for Optical Engineering. 7962P, p. 1-4 4 p.

    Research output: Contribution to journalConference articleScientificpeer-review

  14. Regional heterogeneity changes in DCE-MRI as response to isolated limb perfusion in experimental soft-tissue sarcomas

    Alic, L., van Vliet, M., Wielopolski, PA., ten Hagen, TLM., Dijke, CF., Niessen, WJ. & Veenland, JF., 2013, In : Contrast Media & Molecular Imaging. 8, 4, p. 340-349 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  15. Regression-based cardiac motion prediction from single-phase CTA

    Metz, CT., Baka, N., Kirisli, H., Schaap, M., Klein, S., Neefjes, LA., Mollet, NR., Lelieveldt, BPF., Bruijne, M. D., Niessen, WJ. & van Walsum, T., 2012, In : IEEE Transactions on Medical Imaging. 31, 6, p. 1311-1325 15 p.

    Research output: Contribution to journalArticleScientificpeer-review

  16. Replication Study of Chr17q25 With Cerebral White Matter Lesion Volume

    Verhaaren, BFJ., Boer, R., Vernooij, MW., Rivadeneira, F., Uitterlinden, AG., Hofman, A., Krestin, GP., van der Lugt, A., Niessen, WJ., Breteler, MM. & Arfan Ikram, M., 2011, In : Stroke. 42, p. 3297-3299 3 p.

    Research output: Contribution to journalArticleScientificpeer-review

  17. Reproducible white matter tract segmentation using 3D U-net on a large-scale DTI dataset

    Li, B., de Groot, M., Vernooij, M. W., Ikram, M. A., Niessen, W. J. & Bron, E. E., 2018, Machine Learning in Medical Imaging - 9th International Workshop, MLMI 2018, Held in Conjunction with MICCAI 2018, Proceedings. Shi, Y., Suk, H-I. & Liu, M. (eds.). Springer Verlag, Vol. 11046 LNCS. p. 205-213 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11046 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  18. Respiratory motion estimation in x-ray angiography for improved guidance during coronary interventions

    Baka, N., Lelieveldt, BPF., Schultz, C., Niessen, WJ. & van Walsum, T., 2015, In : Physics in Medicine and Biology. 60, 9, p. 3617-3637 21 p.

    Research output: Contribution to journalArticleScientificpeer-review

  19. Response to Dr Fried & Dr Kievit, and Dr Malhi et al.

    Schmaal, L., Veltman, D. J., Van Erp, T. G. M., Smann, P. G., Frodl, T., Jahanshad, N., Loehrer, E., Vernooij, M. W., Niessen, W. J., Ikram, M. A. & More Authors, 2016, In : Molecular Psychiatry. 21, 6, p. 726-728

    Research output: Contribution to journalComment/Letter to the editorScientificpeer-review

  20. Retinal microvasculature and white matter microstructure

    Mutlu, U., Cremers, L. G. M., De Groot, M., Hofman, A., Niessen, W. J., Van Der Lugt, A., Klaver, C. C. W., Ikram, M. A., Vernooij, M. W. & Ikram, M. K., 2016, In : Neurology. 87, 10, p. 1003-1010 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  21. Retinal neurodegeneration and brain MRI markers: The Rotterdam Study

    Mutlu, U., Bonnemaijer, P. W. M., Ikram, M. A., Colijn, J. M., Cremers, L. G. M., Buitendijk, G. H. S., Vingerling, J. R., Niessen, W. J., Vernooij, M. W., Klaver, C. C. W. & Ikram, M. K., 1 Dec 2017, In : Neurobiology of Aging: age-related phenomena, neurodegeneration and neuropathology. 60, p. 183-191 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  22. Retinal neurodegeneration on optical coherence tomography and cerebral atrophy

    Ong, Y-T., Hilal, S., Cheung, CY., Venketasubramanian, N., Niessen, WJ., Vrooman, H., Anuar, AR., Chew, M., Chen, C., Wong, TY. & Ikram, MK., 2015, In : Neuroscience Letters. 584, p. 12-16 5 p.

    Research output: Contribution to journalArticleScientificpeer-review

  23. Retinal vascular calibers associate differentially with cerebral gray matter and white matter atrophy

    Ikram, MK., de Jong, FJ., Vernooij, MW., Hofman, A., Niessen, WJ., van der Lugt, A., Klaver, CC. & Ikram, MA., 2013, In : Alzheimer Disease and Associated Disorders. 27, 4, p. 351-355 5 p.

    Research output: Contribution to journalArticleScientificpeer-review

  24. Risk factors and consequences of cortical thickness in an Asian population

    Hilal, S., Xin, X., Ang, SL., Tan, CS., Venketasubramanian, N., Niessen, WJ., Vrooman, H., Wong, TY., Chen, C. & Ikram, MK., 2015, In : Medicine (Baltimore): analytical reviews of general medicine, neurology, psychiatry, dermatology and pediatrics. 94, 23, p. 1-8 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  25. Robust CTA lumen segmentation of the atherosclerotic carotid artery bifurcation in a large patient population

    Manniesing, R., Schaap, M., Rozie, S., Hameeteman, K., Vukadinovic, D., van der Lugt, A. & Niessen, WJ., 2010, In : Medical Image Analysis. 14, 6, p. 759-769 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  26. Robust Shape Regression for Supervised Vessel Segmentation and its Application to Coronary Segmentation in CTA

    Schaap, M., van Walsum, T., Neefjes, L., Metz, C., Capuano, E., Bruijne, M. D. & Niessen, WJ., 2011, In : IEEE Transactions on Medical Imaging. 30, 11, p. 1974-1986 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  27. Robust motion correction in the frequency domain of cardiac MR stress perfusion sequences

    Gupta, V., van de Giessen, M., Kirisli, H., Kirschbaum, SW., Niessen, WJ. & Lelieveldt, BPF., 2012, In : Lecture Notes in Computer Science. 7510, p. 667-674 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  28. Robustness and complexity of a minimally invasive vascular intervention simulation system

    Alderliesten, T., Konings, MK. & Niessen, WJ., 2006, In : Medical Physics. 33, 12, p. 4758-4769 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  29. Sarcopenia impairs survival in patients with potentially curable hepatocellular carcinoma

    Levolger, S., van Vledder, MG., Muslem, R., Koek, M., Niessen, WJ., de Man, RA., de Bruin, RWF. & IJzermans, JNM., 2015, In : Journal of Surgical Oncology. 112, 2, p. 208-213 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  30. Segmentation for image guided interventions

    Niessen, WJ., 2008, Image Guided Surgery. Peters, T. & Cleary, K. (eds.). Springer Verlag, p. 219-241 500 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

  31. Segmentation of the outer vessel wall of the common carotid artery in CTA

    Vukadinovic, D., van Walsum, T., Rozie, S., de Weert, TT., Manniesing, R., van der Lugt, A. & Niessen, WJ., 2010, In : IEEE Transactions on Medical Imaging. 29, 1, p. 65-67 3 p.

    Research output: Contribution to journalArticleScientificpeer-review

  32. Selective deblurring for improved calcificaton visualization and quantification in carotid CT angiografphy: validation using micro-CT

    Rollano-Hijarrubia, E., Manniesing, R. & Niessen, WJ., 2009, In : IEEE Transactions on Medical Imaging. 28(3), p. 446-453 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  33. Semi-automatic MRI segmentation and volume quantification of intra-plaque hemorrhage

    Tang, H., Selwaness, M., Hameeteman, R., van Dijk, A., van der Lugt, A., Witteman, JC., Niessen, WJ., van Vliet, L. & van Walsum, T., 2014, In : International Journal of Computer Assisted Radiology and Surgery. 10, 1, p. 1-8 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  34. Semi-automatic coronary artery centerline extraction in computed tomography angiography data

    Metz, C., Schaap, M., van der Giessen, A., van Walsum, T. & Niessen, WJ., 2007, Proc. 4th IEEE Int. Symposium on Biomedical Imaging: From Nano to Macro. s.n. (ed.). IEEE Society, p. 856-859 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  35. Semiautomatic Carotid Lumen Segmentation for Quantification of Lumen Geometry in Multispectral MRI

    Tang, H., van Walsum, T., van Onkelen, RS., Hameeteman, K., Klein, S., Schaap, M., Tori, FL., van den Bouwhuijsen, QJA., Witteman, JCM., van der Lugt, A., van Vliet, LJ. & Niessen, WJ., 2012, In : Medical Image Analysis. 16, 6, p. 1202-1215 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  36. Shape Constrained Vessel Centerline Extraction by Integrating Surface Evolution and Topology Analysis

    Manniesing, R. & Niessen, WJ., 2006, From Nano to Macro. Christensen, G., Coatrieux, JL., Fessler, J., Kovacevic, J., Liang, ZP., Meijering, E., Moura, J., Murphy, B., Niessen, W., Roux, C., Unser, M. & Wilson, D. (eds.). Piscataway: IEEE Society, p. 165-168 4 p. (International Symposium on Biomedical Imaging. Proceedings; vol. 4).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  37. Simultaneous Multiresolution Strategies for Nonrigid Image Registration

    Sun, W., Niessen, WJ., van Stralen, M. & Klein, S., 2013, In : IEEE Transactions on Image Processing. 22, 12, p. 4905-4917 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  38. Small coronary calcifications are not detectable by 64-slice contrast enhanced computed tomography

    van der Giessen, AG., Gijsen, FJH., Wentzel, JJ., Jairam, PM., van Walsum, T., Neefjes, L., Mollet, NRA., Niessen, WJ., van de Vosse, FN., Feyter, PJ. & van der Steen, AFW., 2011, In : International Journal of Cardiovascular Imaging. 27, p. 143-152 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  39. Standardized evaluation framework for evaluating coronary artery stenosis detection, stenosis quantification and lumen segmentation algorithms in computed tomography angiography

    Kirisli, HA., Schaap, M., Metz, CT., Dharampal, AS., Meijboom, WB., Papadopoulou, SL., Dedic, A., Nieman, K., de Graaf, MA., Meijs, MFL., Cramer, MJ., Broersen, A., Cetin, S., Eslami, A., Florez-Valencia, L., Lor, KL., Matuszewski, B., Melki, I., Mohr, B., Oksuz, I. & 18 othersShahzad, R., Wang, C., Kitslaar, P. H., Unal, G., Katouzian, A., Orkisz, M., Chen, CM., Precioso, F., Najman, L., Masood, S., Unay, D., van Vliet, LJ., Moreno, R., Goldenberg, R., Vucini, E., Krestin, GP., Niessen, WJ. & van Walsum, T., 2013, In : Medical Image Analysis. 17, p. 859-876 18 p.

    Research output: Contribution to journalArticleScientificpeer-review

  40. Standardized evaluation metholology and reference database for evaluating coronary artery centerline extraction algorithms

    Schaap, M., Metz, CT., van Walsum, T., van der Giessen, AG., Weustink, AC., Mollet, NRA., Bauer, C., Bogunovic, H., de Castro, C., Deng, X., Dikici, E., O'Donnel, T., Frenay, M., Friman, O., Hernández Hoyos, M., Kitslaar, P. H., Krissian, K., Kühnel, C., Luengo-Oroz, MA., Orkisz, M. & 10 othersSmedby, Ö., Styner, M., Szymczak, A., Tek, H., Wang, H., Warfield, S. K., Zambal, S., Zhang, Y., Krestin, GP. & Niessen, WJ., 2009, In : Medical Image Analysis. 13(5), p. 701-714 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  41. Standardized evaluation of algorithms for computer-aided diagnosis of dementia based on structural MRI: The CADDementia challenge

    Niessen, WJ. & et, A., 2015, In : NeuroImage. 111, p. 562-579 18 p.

    Research output: Contribution to journalArticleScientificpeer-review

  42. Statistical analysis of minimum cost path based structural brain connectivity

    Boer, R. D., Schaap, M., van der Lijn, F., Vrooman, HA., de Groot, M., van der Lugt, A., Arfan Ikram, M., Vernooij, MW., Breteler, MMB. & Niessen, WJ., 2011, In : NeuroImage. 55, p. 557-565 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  43. Statistical coronary motion models for 2D+t/3D registration of X-ray coronary angiography and CTA

    Baka, N., Metz, CT., Schultz, C., Neefjes, L., Geuns, RJ. V., Lelieveldt, BPF., Niessen, WJ., van Walsum, T. & Bruijne, M. D., 2013, In : Medical Image Analysis. 17, p. 698-709 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  44. Statistical shape model based femur kinematics from biplane fluoroscopy

    Baka, N., Bruijne, M. D., van Walsum, T., Kaptein, BL., Giphart, JE., Schaap, M., Niessen, WJ. & Lelieveldt, BPF., 2012, In : IEEE Transactions on Medical Imaging. 31, 8, p. 1573-1583 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  45. Stochastic optimization with randomized smoothing for image registration

    Sun, W., Poot, D. H. J., Smal, I., Yang, X., Niessen, W. J. & Klein, S., 2017, In : Medical Image Analysis. 35, p. 146-158 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  46. Structural and diffusion MRI measures of the hippocampus and memory performance

    den Heijer, T., van der Lijn, F., Vernooij, M. W., de Groot, M., Koudstaal, PJ., van der Lugt, A., Krestin, GP., Hofman, A., Niessen, WJ. & Breteler, MMB., 2012, In : NeuroImage. 63, 4, p. 1782-1789 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  47. Structural and microstructural brain changes predict impairment in daily functioning

    Verlinden, VJA., van der Geest, JN., de Groot, M., Hofman, A., Niessen, WJ., van der Lugt, A., Vernooij, MW. & Ikram, MA., 2014, In : The American Journal of Medicine. 127, 11, p. 1089-1096 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  48. Structural brain alterations in community dwelling individuals with chronic joint pain

    de Kruijf, M., Bos, D., Huygen, F. J. P. M., Niessen, WJ., Tiemeier, H., Hofman, A., Uitterlinden, AG., Vernooij, MW., Ikram, MA. & van Meurs, JB., 2015, In : American Journal of Neuroradiology. PP, 99, p. 1-9 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  49. Subclinical cardiac dysfunction increases the risk of stroke and dementia

    de Bruijn, RFAG., Portegies, MLP., Leening, MJG., Bos, MJ., Hofman, A., van der Lugt, A., Niessen, WJ., Vernooij, MW., Franco, OH., Koudstaal, PJ. & Ikram, MA., 2015, In : Neurology. 84, 8, p. 833-840 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  50. Subcortical atrophy in cognitive impairment and dementia

    Hilal, S., Amin, SM., Venketasubramanian, N., Niessen, WJ., Vrooman, H., Wong, TY., Chen, C. & Ikram, MK., 2015, In : Journal of Alzheimer's Disease. 48, 3, p. 813-823 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

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