1. Subcortical brain alterations in major depressive disorder: findings from the ENIGMA Major Depressive Disorder working group

    Niessen, WJ. & et, A., 2015, In : Molecular Psychiatry. PP, pp, p. 1-7 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  2. Super-Resolution Methods in MRI: Can They Improve the Trade-Off Between Resolution

    Plenge, E., Poot, DHJ., Bernsen, MR., Kotek, G., Houston, B., Wielopolski, P., van der Weerd, L., Niessen, WJ. & Meijering, E., 2012, In : Magnetic Resonance in Medicine. 68, 6, p. 1983-1993 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  3. Super-resolution reconstruction of whole-body MRI mouse data: an interactive approach

    Khmelinskii, A., Kok, P., Dzyubachyk, O., Poot, DHJ., Suidgeest, E., Botha, CP., Niessen, WJ., van der Weerd, L., Meijering, E. & Lelieveldt, BPF., 2012, Proceedings of the 9th Symposium on Biomedical Imaging 2012: From Nano to Macro. Frangi, A., Santos, A., Ober, R. & Ruekert, D. (eds.). Piscataway, NJ, USA: IEEE Society, p. 1723-1726 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  4. Symmetry based computer aided segmentation of occluded cerebral arteries on CT angiography

    Santos, EMM., Marquering, HA., Berkhemer, OA., van der Zwam, W., van der Lugt, A., Majoie, CB. & Niessen, WJ., 2014, 13th Mediterranean Conference on Medical and Biological Engineering and Computing 2013, MEDICON 2013. nb (ed.). nb: nb, p. 237-240 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  5. TMEM106B influences volume of left-sided temporal lobe and Interhemispheric structures in the general population

    Adams, HHH., Verhaaren, BFJ., Vrooman, HA., Uitterlinden, AG., Hofman, A., van Duijn, CM., van der Lugt, A., Niessen, WJ., Vernooij, MW. & Ikram, MA., 2014, In : Biological Psychiatry. 76, 6, p. 503-508 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  6. The Missing Link in the Pathophysiology of Vascular Cognitive Impairment: Design of the Heart-Brain Study

    Hooghiemstra, A. M., Bertens, A. S., Leeuwis, A. E., Bron, E. E., Bots, M. L., Brunner-La Rocca, H. P., De Craen, A. J. M., van der Geest, R. J., Greving, J. P., Kappelle, L. J., Niessen, W. J., van Oostenbrugge, R. J., van Osch, M. J. P., de Roos, A., van Rossum, A. C., Biessels, G. J., van Buchem, M. A., Daemen, M. J. A. P. & van der Flier, W. M., 2017, In : Cerebrovascular Diseases Extra. 7, 3, p. 140-152

    Research output: Contribution to journalArticleScientificpeer-review

  7. The Relation of Uric Acid to Brain Atrophy and Cognition: The Rotterdam Scan Study

    Verhaaren, BFJ., Vernooij, MW., Dehghan, A., Vrooman, HA., Boer, R. D., Hofman, A., Witteman, JCM., Niessen, WJ., Breteler, MMB., van der Lugt, A. & Arfan Ikram, M., 2013, In : Neuroepidemiology. 41, p. 29-34 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  8. The Rotterdam Scan Study: design and update up to 2012

    Ikram, MA., van der Lugt, A., Niessen, WJ., Krestin, GP., Koudstaal, PJ., Hofman, A., Breteler, MMB. & Vernooij, M. W., 2011, In : European Journal of Epidemiology. 26, p. 811-824 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  9. The Rotterdam Scan Study: design update 2016 and main findings

    Ikram, MA., van der Lugt, A., Niessen, WJ., Koudstaal, PJ., Krestin, GP., Hofman, A., Bos, D. & Vernooij, MW., 2015, In : European Journal of Epidemiology. 30, 12, p. 1299-1315 17 p.

    Research output: Contribution to journalArticleScientificpeer-review

  10. The Thyroid Hormone Receptor Alpha Locus and White Matter Lesions: A Role for the Clock Gene REV-ERBa

    Medici, R., Ikram, MA., van der Lijn, F., den Heijer, T., Vernooij, MW., Hofman, A., Niessen, WJ., Visser, TJ., Breteler, MMB. & Peeters, R., 2012, In : Thyroid. 22, 11, p. 1181-1186 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  11. The bidirectional association between reduced cerebral blood flow and brain

    Zonneveld, HI., Loehrer, EA., Hofman, A., Niessen, WJ., van der Lugt, A., Krestin, GP., Ikram, MA. & Vernooij, MW., 2015, In : Journal of Cerebral Blood Flow and Metabolism. 35, 11, p. 1882-1887 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  12. The effect of hippocampal function, volume and connectivity on posterior cingulate cortex functioning during episodic memory fMRI in mild cognitive impairment

    Papma, J. M., Smits, M., De Groot, M., Mattace-Raso, F. U. S., van der Lugt, A., Vrooman, H. A., Niessen, W. J., Koudstaal, P. J., van Swieten, J. C., van der Veen, F. M. & Prins, N. D., 1 Sep 2017, In : European Radiology. 27, 9, p. 3716-3724 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  13. The effect of non-contrast CT slice thickness on thrombus density and perviousness assessment

    Tolhuisen, M. L., Enthoven, J., Santos, E. M. M., Niessen, W. J., Beenen, L. F. M., Dippel, D. W. J., van der Lugt, A., van Zwam, W. H., Roos, Y. B. W. E. M., van Oostenbrugge, R. J. & More Authors, 2017, Molecular Imaging, Reconstruction and Analysis of Moving Body Organs, and Stroke Imaging and Treatment - 5th International Workshop, CMMI 2017 2nd International Workshop, RAMBO 2017 and 1st International Workshop, SWITCH 2017 Held in Conjunction with MICCAI 2017, Proceedings. Cardoso, J., Arbel, T. & Gao, F. (eds.). Springer Verlag, Vol. 10555 LNCS. p. 168-175 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10555 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  14. The role of cerebellar volume in cognition in the general elderly population

    Hoogendam, YY., van der Geest, JN., Niessen, WJ., van der Lugt, A., Hofman, A., Vernooij, MW. & Ikram, MA., 2014, In : Alzheimer Disease and Associated Disorders. 28, 4, p. 352-357 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  15. The role of the posterior fossa in developing Chiari I malformation in children with craniosynostosis syndromes

    Rijken, BFM., Lequin, MH., van der Lijn, F., van Veelen-Vincent, MLC., de Rooi, J., Hoogendam, YY., Niessen, WJ. & Mathijssen, IMJ., 2015, In : Journal of Cranio-Maxillofacial Surgery. 43, 6, p. 813-819 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  16. The structural disconnectome: A pathology-sensitive extension of the structural connectome

    Langen, C. D., Vernooij, M. W., Cremers, L. G. M., Huizinga, W., De Groot, M., Ikram, M. A., White, T. & Niessen, W. J., 2017, 2017 IEEE 14th International Symposium on Biomedical Imaging, ISBI 2017. IEEE Computer Society, p. 366-370 7950539

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  17. The use of atlas registration and graph cuts for prostate segmentation in magnetic resonance images

    Korsager, A. S., Fortunati, V., Van Der Lijn, F., Carl, J., Niessen, W., Østergaard, L. R. & Van Walsum, T., 2015, In : Medical Physics. 42, 4, p. 1614-1624

    Research output: Contribution to journalArticleScientificpeer-review

  18. The value of hippocampal volume, shape, and texture for 11-year prediction of dementia: a population-based study

    Achterberg, H. C., Sørensen, L., Wolters, F. J., Niessen, W. J., Vernooij, M. W., Ikram, M. A., Nielsen, M. & de Bruijne, M., 2019, In : Neurobiology of Aging. 81, p. 58-66

    Research output: Contribution to journalArticleScientificpeer-review

  19. Thinner retinal layers are associated with changes in the visual pathway: A population-based study

    Mutlu, U., Ikram, M. K., Roshchupkin, G. V., Bonnemaijer, P. W. M., Colijn, J. M., Vingerling, J. R., Niessen, W. J., Ikram, M. A., Klaver, C. C. W. & Vernooij, M. W., 2018, In : Human Brain Mapping. 39, 11, p. 4290-4301 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  20. Three-Dimensional Rotational X-Ray Navigation for Needle Guidance in Percutaneous Vertebroplasty: An Accuracy Study

    van de Kraats, E. B., van Walsum, T., Verlaan, J-J., Voormolen, MHJ., Mali, WPT. & Niessen, WJ., 2006, In : Spine (Philadelphia, 1976). 31, 12, p. 1359-1364 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  21. Three-dimensional carotid ultrasound plaque texture predicts vascular events

    van Engelen, A., Wannarong, T., Parraga, G., Niessen, WJ., Fenster, A., Spence, JD. & Bruijne, M., 2014, In : Stroke. 45, p. 2695-2701 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  22. Three-dimensional inversion recovery manganese-enhanced MRI of mouse brain using super-resolution reconstruction to visualize nuclei involved in higher brain function

    Plenge, E., Poole, DS., Poot, DHJ., Lakke, EAJF., Niessen, WJ., Meijering, E. & van der Weerd, L., 2014, In : NMR in Biomedicine. 27, p. 749-759 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  23. Three-dimensional registration of histology of human atherosclerotic carotid plaques to in-vivo imaging

    Groen, HC., van Walsum, T., Rozie, S., Klein, S., van Gaalen, K., Gijsen, FJH., Wielopolski, PA., Beusekom, H., de Crom, R., Verhagen, HJM., van der Steen, AFW., van der Lugt, A., Wentzel, JJ. & Niessen, WJ., 2010, In : Journal of Biomechanics. 43, p. 2087-2092 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  24. Thrombus Permeability Is Associated with Improved Functional Outcome and Recanalization in Patients with Ischemic Stroke

    Santos, E. M. M., Marquering, H. A., Den Blanken, M. D., Berkhemer, O. A., Boers, A. M. M., Yoo, A. J., Beenen, L. F., Treurniet, K. M., Wismans, C., Niessen, W. J. & More Authors, 2016, In : Stroke. 47, 3, p. 732-741

    Research output: Contribution to journalArticleScientificpeer-review

  25. Tissue segmentation of head and neck CT images for treatment planning: A multiatlas approach combined with intensity modeling

    Fortunati, V., Verhaart, RF., van der Lijn, F., Niessen, WJ., Veenland, JF., Paulides, MM. & van Walsum, T., 2013, In : Medical Physics. 40, 7, p. 1-14 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  26. Total Correlation-Based Groupwise Image Registration for Quantitative MRI

    Guyader, J. M., Huizinga, W., Fortunati, V., Poot, D. H., Kranenburg, M. V., Veenland, J. F., Paulides, M. M., Niessen, W. J. & Klein, S., 16 Dec 2016, Proceedings - 29th IEEE Conference on Computer Vision and Pattern Recognition Workshops, CVPRW 2016. IEEE Computer Society, p. 626-633 8 p. 7789574

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  27. Total antioxidant capacity of the diet and major neurologic outcomes in older adults

    Devore, EE., Feskens, E., Ikram, MA., den Heijer, T., Vernooij, MW., van der Lijn, F., Hofman, A., Niessen, WJ. & Breteler, MMB., 2013, In : Neurology. 80, 5, p. 904-910 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  28. Towards a real-time minimally-invasive vascular intervention simulation system

    Alderliesten, T., Bosman, PAN. & Niessen, WJ., 2007, In : IEEE Transactions on Medical Imaging. 26, 1, p. 128-132 5 p.

    Research output: Contribution to journalArticleScientificpeer-review

  29. Towards robust CT-ultrasound registration using deep learning methods

    Sun, Y., Moelker, A., Niessen, W. J. & van Walsum, T., 2018, Understanding and Interpreting Machine Learning in Medical Image Computing Applications - First International Workshops MLCN 2018, DLF 2018, and iMIMIC 2018, Held in Conjunction with MICCAI 2018, Proceedings. Springer Verlag, Vol. 11038 LNCS. p. 43-51 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11038 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  30. Tract-specific white matter degeneration in aging. The Rotterdam study.

    de Groot, M., Ikram, MA., Akoudad, S., Krestin, GP., Hofman, A., van der Lugt, A., Niessen, WJ. & Vernooij, MW., 2014, In : Alzheimer's & Dementia. p. 1-10 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  31. Tract-specific white matter degeneration in aging: The Rotterdam Study

    de Groot, M., Ikram, MA., Akoudad, S., Krestin, GP., Hofman, A., van der Lugt, A., Niessen, WJ. & Vernooij, M. W., 2015, In : Alzheimer's & Dementia. 11, 3, p. 321-330 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  32. Tract-specific white matter microstructure and gait in humans

    Verlinden, V. J. A., De Groot, M., Cremers, L. G. M., van der Geest, J. N., Hofman, A., Niessen, W. J., Van Der Lugt, A., Vernooij, M. W. & Ikram, M. A., 1 Jul 2016, In : Neurobiology of Aging: age-related phenomena, neurodegeneration and neuropathology. 43, p. 164-173 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  33. Trajectories of imaging markers in brain aging: the Rotterdam Study

    Vinke, E. J., de Groot, M., Venkatraghavan, V., Klein, S., Niessen, W. J., Ikram, M. A. & Vernooij, M. W., 1 Nov 2018, In : Neurobiology of Aging. 71, p. 32-40 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  34. Two point minimum cost path approach for CTA coronary centerline extraction, 3D segmentation in the clinic: a grand challenge II

    Metz, CT., Schaap, M., van Walsum, T. & Niessen, WJ., 2008, Proceedings MICCAI 2008 workshop. nn (ed.). New York: MICCAI, p. 1-8 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  35. User Interaction in Semi-Automatic Segmentation of Organs at Risk: A Case Study in Radiotherapy

    Ramkumar, A., Dolz, J., Kirisli, HA., Adebahr, S., Schimek-Jasch, T., Nestle, U., Massoptier, L., Varga, E., Stappers, PJ., Niessen, WJ. & Song, Y., 2016, In : Journal of Digital Imaging. 29, 2, p. 264-277 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  36. Using GOMS and NASA-TLX to Evaluate Human-Computer Interaction Process in Interactive Segmentation

    Ramkumar, A., Stappers, P. J., Niessen, W., Adebahr, S., Schimek-Jasch, T., Nestle, U. & Song, Y., 2017, In : International Journal of Human-Computer Interaction. 33, 2, p. 123-134 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  37. Validation of Renal Artery Dimensions Measured by Magnetic Resonance Angiography in Patients Referred for Renal Sympathetic Denervation

    van Kranenburg, M., Karanasos, A., Chelu, R. G., van der Heide, E., Ouhlous, M., Nieman, K., van Mieghem, N., Krestin, G., Niessen, W., Zijlstra, F., van Geuns, R. J. & Daemen, J., 2015, In : Academic Radiology. 22, 9, p. 1106-1114

    Research output: Contribution to journalArticleScientificpeer-review

  38. Vascular Brain Disease and Depression in the Elderly

    Ikram, MA., Luijendijk, HJ., Vernooij, MW., Hofman, A., Niessen, WJ., van der Lugt, A., Tiemeier, H. & Breteler, MMB., 2010, In : Epidemiology. 21, 1, p. 78-81 4 p.

    Research output: Contribution to journalArticleScientificpeer-review

  39. Vascular image analysis: From vessel enhancement to intravascular invterventions

    Niessen, WJ., 2006, ASCI 2006: Proceedings of the 12th annual conference of the Advanced School for Computing and Imaging. Lelieveldt, B., Haverkort, B., de Laat, C. T. A. M. & Heijnsdijk, J. W. J. (eds.). Delft: ASCI, p. 8-8 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  40. Vascular risk factors, apolipoprotein E, and hippocampal decline on magnetic resonance imaging over a 10-year follow-up

    den Heijer, T., van der Lijn, F., Ikram, A. & Niessen, WJ., 2012, In : Alzheimer's & Dementia. 8, 5, p. 417-425 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  41. Vessel Axis Tracking Using Topology constrained Surface Evolution

    Manniesing, R., Viergever, MA. & Niessen, WJ., 2007, In : IEEE Transactions on Medical Imaging. 26, 3, p. 309-316 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  42. Vessel Enhancing Diffusion: A Scale Space Representation of Vessel Structures

    Manniesing, R., Viergever, MA. & Niessen, WJ., 2006, In : Medical Image Analysis. 10, 6, p. 815-825 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  43. Vessel Specific Coronary Artery Calcium Scoring: An Automatic System

    Shahzad, R., van Walsum, T., Schaap, M., Rossi, A., Klein, S., Wuestink, AC., de Feyter, P., van Vliet, LJ. & Niessen, WJ., 2012, In : Academic Radiology. p. 1-9 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  44. Visceral adipose tissue: The link with esophageal adenocarcinoma

    Massl, R., van Blankenstein, M., Jeumink, S., Hermans, JJ., de Haan, MC., Stoker, J., Koek, M., Niessen, WJ., Steverberg, EW., Looman, CW. & Kuipers, EJ., 2014, In : Scandinavian Journal of Gastroenterology. 49, 4, p. 449-457 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  45. Volume preserving image registration via a post-processing stage

    Hameeteman, K., Veenland, JF. & Niessen, WJ., 2008, In : Proceedings of SPIE- International Society for Optical Engineering. 6914, p. 1-10 10 p.

    Research output: Contribution to journalConference articleScientificpeer-review

  46. Wavelet based free-form deformations for nonrigid registration

    Sun, W., Niessen, WJ. & Klein, S., 2014, In : Progress in Biomedical Optics and Imaging. 9034, art nr 90343N, p. 1-4 4 p.

    Research output: Contribution to journalConference articleScientificpeer-review

  47. White matter atrophy and lesion formation explain the loss of structural integrity of white matter in aging

    Vernooij, M. W., de Groot, M., van der Lugt, A., Ikram, MA., Krestin, GP., Hofman, A., Niessen, WJ. & Breteler, MM., 2008, In : NeuroImage. 15, 43(3), p. 470-477 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  48. White matter degeneration with aging: Longitudinal diffusion MR imaging analysis

    de Groot, M., Cremers, LGM., Arfan Ikram, M., Hofman, A., Krestin, GP., van der Lugt, A., Niessen, WJ. & Vernooij, MW., 2015, In : Radiology. PP, 99, p. 1-10 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  49. White matter lesion extension to automatic brain tissue segmentation on MRI

    Boer, R., Vrooman, HA., van der Lijn, F., Vernooij, M. W., Ikram, MA., van der Lugt, A., Breteler, MM. & Niessen, WJ., 2009, In : NeuroImage. 1;45(4), p. 1151-1161 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  50. White matter lesion progression: Genome-wide search for genetic influences

    Hofer, E., Cavalieri, M., Bis, JC., DeCarli, C., Fornage, M., Sigurdsson, S., Srikanth, V., Trompet, S., Verhaaren, BFJ., Wolf, C. & Niessen, WJ., 2015, In : Stroke. 46, 11, p. 3048-3057 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

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