1. Spatially regularized shape analysis of the hippocampus using P-spline based shape regression

    Achterberg, H. C., de Rooi, J., Vernooij, M. W., Arfan Ikram, M., Niessen, W., Eilers, P. & de Bruijne, M., 2019, In : IEEE Journal of Biomedical and Health Informatics. 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  2. Standardized evaluation framework for evaluating coronary artery stenosis detection, stenosis quantification and lumen segmentation algorithms in computed tomography angiography

    Kirisli, HA., Schaap, M., Metz, CT., Dharampal, AS., Meijboom, WB., Papadopoulou, SL., Dedic, A., Nieman, K., de Graaf, MA., Meijs, MFL., Cramer, MJ., Broersen, A., Cetin, S., Eslami, A., Florez-Valencia, L., Lor, KL., Matuszewski, B., Melki, I., Mohr, B., Oksuz, I. & 18 othersShahzad, R., Wang, C., Kitslaar, P. H., Unal, G., Katouzian, A., Orkisz, M., Chen, CM., Precioso, F., Najman, L., Masood, S., Unay, D., van Vliet, LJ., Moreno, R., Goldenberg, R., Vucini, E., Krestin, GP., Niessen, WJ. & van Walsum, T., 2013, In : Medical Image Analysis. 17, p. 859-876 18 p.

    Research output: Contribution to journalArticleScientificpeer-review

  3. Standardized evaluation metholology and reference database for evaluating coronary artery centerline extraction algorithms

    Schaap, M., Metz, CT., van Walsum, T., van der Giessen, AG., Weustink, AC., Mollet, NRA., Bauer, C., Bogunovic, H., de Castro, C., Deng, X., Dikici, E., O'Donnel, T., Frenay, M., Friman, O., Hernández Hoyos, M., Kitslaar, P. H., Krissian, K., Kühnel, C., Luengo-Oroz, MA., Orkisz, M. & 10 othersSmedby, Ö., Styner, M., Szymczak, A., Tek, H., Wang, H., Warfield, S. K., Zambal, S., Zhang, Y., Krestin, GP. & Niessen, WJ., 2009, In : Medical Image Analysis. 13(5), p. 701-714 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  4. Standardized evaluation of algorithms for computer-aided diagnosis of dementia based on structural MRI: The CADDementia challenge

    Niessen, WJ. & et, A., 2015, In : NeuroImage. 111, p. 562-579 18 p.

    Research output: Contribution to journalArticleScientificpeer-review

  5. Statistical analysis of minimum cost path based structural brain connectivity

    Boer, R. D., Schaap, M., van der Lijn, F., Vrooman, HA., de Groot, M., van der Lugt, A., Arfan Ikram, M., Vernooij, MW., Breteler, MMB. & Niessen, WJ., 2011, In : NeuroImage. 55, p. 557-565 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  6. Statistical coronary motion models for 2D+t/3D registration of X-ray coronary angiography and CTA

    Baka, N., Metz, CT., Schultz, C., Neefjes, L., Geuns, RJ. V., Lelieveldt, BPF., Niessen, WJ., van Walsum, T. & Bruijne, M. D., 2013, In : Medical Image Analysis. 17, p. 698-709 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  7. Statistical shape model based femur kinematics from biplane fluoroscopy

    Baka, N., Bruijne, M. D., van Walsum, T., Kaptein, BL., Giphart, JE., Schaap, M., Niessen, WJ. & Lelieveldt, BPF., 2012, In : IEEE Transactions on Medical Imaging. 31, 8, p. 1573-1583 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  8. Stochastic optimization with randomized smoothing for image registration

    Sun, W., Poot, D. H. J., Smal, I., Yang, X., Niessen, W. J. & Klein, S., 2017, In : Medical Image Analysis. 35, p. 146-158 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  9. Structural and diffusion MRI measures of the hippocampus and memory performance

    den Heijer, T., van der Lijn, F., Vernooij, M. W., de Groot, M., Koudstaal, PJ., van der Lugt, A., Krestin, GP., Hofman, A., Niessen, WJ. & Breteler, MMB., 2012, In : NeuroImage. 63, 4, p. 1782-1789 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  10. Structural and microstructural brain changes predict impairment in daily functioning

    Verlinden, VJA., van der Geest, JN., de Groot, M., Hofman, A., Niessen, WJ., van der Lugt, A., Vernooij, MW. & Ikram, MA., 2014, In : The American Journal of Medicine. 127, 11, p. 1089-1096 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  11. Structural brain alterations in community dwelling individuals with chronic joint pain

    de Kruijf, M., Bos, D., Huygen, F. J. P. M., Niessen, WJ., Tiemeier, H., Hofman, A., Uitterlinden, AG., Vernooij, MW., Ikram, MA. & van Meurs, JB., 2015, In : American Journal of Neuroradiology. PP, 99, p. 1-9 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  12. Subclinical cardiac dysfunction increases the risk of stroke and dementia

    de Bruijn, RFAG., Portegies, MLP., Leening, MJG., Bos, MJ., Hofman, A., van der Lugt, A., Niessen, WJ., Vernooij, MW., Franco, OH., Koudstaal, PJ. & Ikram, MA., 2015, In : Neurology. 84, 8, p. 833-840 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  13. Subcortical atrophy in cognitive impairment and dementia

    Hilal, S., Amin, SM., Venketasubramanian, N., Niessen, WJ., Vrooman, H., Wong, TY., Chen, C. & Ikram, MK., 2015, In : Journal of Alzheimer's Disease. 48, 3, p. 813-823 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  14. Subcortical brain alterations in major depressive disorder: findings from the ENIGMA Major Depressive Disorder working group

    Niessen, WJ. & et, A., 2015, In : Molecular Psychiatry. PP, pp, p. 1-7 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  15. Super-Resolution Methods in MRI: Can They Improve the Trade-Off Between Resolution

    Plenge, E., Poot, DHJ., Bernsen, MR., Kotek, G., Houston, B., Wielopolski, P., van der Weerd, L., Niessen, WJ. & Meijering, E., 2012, In : Magnetic Resonance in Medicine. 68, 6, p. 1983-1993 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  16. Super-resolution reconstruction of whole-body MRI mouse data: an interactive approach

    Khmelinskii, A., Kok, P., Dzyubachyk, O., Poot, DHJ., Suidgeest, E., Botha, CP., Niessen, WJ., van der Weerd, L., Meijering, E. & Lelieveldt, BPF., 2012, Proceedings of the 9th Symposium on Biomedical Imaging 2012: From Nano to Macro. Frangi, A., Santos, A., Ober, R. & Ruekert, D. (eds.). Piscataway, NJ, USA: IEEE Society, p. 1723-1726 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  17. Symmetry based computer aided segmentation of occluded cerebral arteries on CT angiography

    Santos, EMM., Marquering, HA., Berkhemer, OA., van der Zwam, W., van der Lugt, A., Majoie, CB. & Niessen, WJ., 2014, 13th Mediterranean Conference on Medical and Biological Engineering and Computing 2013, MEDICON 2013. nb (ed.). nb: nb, p. 237-240 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  18. TMEM106B influences volume of left-sided temporal lobe and Interhemispheric structures in the general population

    Adams, HHH., Verhaaren, BFJ., Vrooman, HA., Uitterlinden, AG., Hofman, A., van Duijn, CM., van der Lugt, A., Niessen, WJ., Vernooij, MW. & Ikram, MA., 2014, In : Biological Psychiatry. 76, 6, p. 503-508 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  19. The Missing Link in the Pathophysiology of Vascular Cognitive Impairment: Design of the Heart-Brain Study

    Hooghiemstra, A. M., Bertens, A. S., Leeuwis, A. E., Bron, E. E., Bots, M. L., Brunner-La Rocca, H. P., De Craen, A. J. M., van der Geest, R. J., Greving, J. P., Kappelle, L. J., Niessen, W. J., van Oostenbrugge, R. J., van Osch, M. J. P., de Roos, A., van Rossum, A. C., Biessels, G. J., van Buchem, M. A., Daemen, M. J. A. P. & van der Flier, W. M., 2017, In : Cerebrovascular Diseases Extra. 7, 3, p. 140-152

    Research output: Contribution to journalArticleScientificpeer-review

  20. The Relation of Uric Acid to Brain Atrophy and Cognition: The Rotterdam Scan Study

    Verhaaren, BFJ., Vernooij, MW., Dehghan, A., Vrooman, HA., Boer, R. D., Hofman, A., Witteman, JCM., Niessen, WJ., Breteler, MMB., van der Lugt, A. & Arfan Ikram, M., 2013, In : Neuroepidemiology. 41, p. 29-34 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  21. The Rotterdam Scan Study: design and update up to 2012

    Ikram, MA., van der Lugt, A., Niessen, WJ., Krestin, GP., Koudstaal, PJ., Hofman, A., Breteler, MMB. & Vernooij, M. W., 2011, In : European Journal of Epidemiology. 26, p. 811-824 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  22. The Rotterdam Scan Study: design update 2016 and main findings

    Ikram, MA., van der Lugt, A., Niessen, WJ., Koudstaal, PJ., Krestin, GP., Hofman, A., Bos, D. & Vernooij, MW., 2015, In : European Journal of Epidemiology. 30, 12, p. 1299-1315 17 p.

    Research output: Contribution to journalArticleScientificpeer-review

  23. The Thyroid Hormone Receptor Alpha Locus and White Matter Lesions: A Role for the Clock Gene REV-ERBa

    Medici, R., Ikram, MA., van der Lijn, F., den Heijer, T., Vernooij, MW., Hofman, A., Niessen, WJ., Visser, TJ., Breteler, MMB. & Peeters, R., 2012, In : Thyroid. 22, 11, p. 1181-1186 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  24. The bidirectional association between reduced cerebral blood flow and brain

    Zonneveld, HI., Loehrer, EA., Hofman, A., Niessen, WJ., van der Lugt, A., Krestin, GP., Ikram, MA. & Vernooij, MW., 2015, In : Journal of Cerebral Blood Flow and Metabolism. 35, 11, p. 1882-1887 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  25. The effect of hippocampal function, volume and connectivity on posterior cingulate cortex functioning during episodic memory fMRI in mild cognitive impairment

    Papma, J. M., Smits, M., De Groot, M., Mattace-Raso, F. U. S., van der Lugt, A., Vrooman, H. A., Niessen, W. J., Koudstaal, P. J., van Swieten, J. C., van der Veen, F. M. & Prins, N. D., 1 Sep 2017, In : European Radiology. 27, 9, p. 3716-3724 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  26. The effect of non-contrast CT slice thickness on thrombus density and perviousness assessment

    Tolhuisen, M. L., Enthoven, J., Santos, E. M. M., Niessen, W. J., Beenen, L. F. M., Dippel, D. W. J., van der Lugt, A., van Zwam, W. H., Roos, Y. B. W. E. M., van Oostenbrugge, R. J. & More Authors, 2017, Molecular Imaging, Reconstruction and Analysis of Moving Body Organs, and Stroke Imaging and Treatment - 5th International Workshop, CMMI 2017 2nd International Workshop, RAMBO 2017 and 1st International Workshop, SWITCH 2017 Held in Conjunction with MICCAI 2017, Proceedings. Cardoso, J., Arbel, T. & Gao, F. (eds.). Springer, Vol. 10555 LNCS. p. 168-175 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10555 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  27. The role of cerebellar volume in cognition in the general elderly population

    Hoogendam, YY., van der Geest, JN., Niessen, WJ., van der Lugt, A., Hofman, A., Vernooij, MW. & Ikram, MA., 2014, In : Alzheimer Disease and Associated Disorders. 28, 4, p. 352-357 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  28. The role of the posterior fossa in developing Chiari I malformation in children with craniosynostosis syndromes

    Rijken, BFM., Lequin, MH., van der Lijn, F., van Veelen-Vincent, MLC., de Rooi, J., Hoogendam, YY., Niessen, WJ. & Mathijssen, IMJ., 2015, In : Journal of Cranio-Maxillofacial Surgery. 43, 6, p. 813-819 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  29. The structural disconnectome: A pathology-sensitive extension of the structural connectome

    Langen, C. D., Vernooij, M. W., Cremers, L. G. M., Huizinga, W., De Groot, M., Ikram, M. A., White, T. & Niessen, W. J., 2017, 2017 IEEE 14th International Symposium on Biomedical Imaging, ISBI 2017. IEEE, p. 366-370 7950539

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  30. The use of atlas registration and graph cuts for prostate segmentation in magnetic resonance images

    Korsager, A. S., Fortunati, V., Van Der Lijn, F., Carl, J., Niessen, W., Østergaard, L. R. & Van Walsum, T., 2015, In : Medical Physics. 42, 4, p. 1614-1624

    Research output: Contribution to journalArticleScientificpeer-review

  31. The value of hippocampal volume, shape, and texture for 11-year prediction of dementia: a population-based study

    Achterberg, H. C., Sørensen, L., Wolters, F. J., Niessen, W. J., Vernooij, M. W., Ikram, M. A., Nielsen, M. & de Bruijne, M., 2019, In : Neurobiology of Aging. 81, p. 58-66

    Research output: Contribution to journalArticleScientificpeer-review

  32. Thinner retinal layers are associated with changes in the visual pathway: A population-based study

    Mutlu, U., Ikram, M. K., Roshchupkin, G. V., Bonnemaijer, P. W. M., Colijn, J. M., Vingerling, J. R., Niessen, W. J., Ikram, M. A., Klaver, C. C. W. & Vernooij, M. W., 2018, In : Human Brain Mapping. 39, 11, p. 4290-4301 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  33. Three-Dimensional Rotational X-Ray Navigation for Needle Guidance in Percutaneous Vertebroplasty: An Accuracy Study

    van de Kraats, E. B., van Walsum, T., Verlaan, J-J., Voormolen, MHJ., Mali, WPT. & Niessen, WJ., 2006, In : Spine (Philadelphia, 1976). 31, 12, p. 1359-1364 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  34. Three-dimensional carotid ultrasound plaque texture predicts vascular events

    van Engelen, A., Wannarong, T., Parraga, G., Niessen, WJ., Fenster, A., Spence, JD. & Bruijne, M., 2014, In : Stroke. 45, p. 2695-2701 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  35. Three-dimensional inversion recovery manganese-enhanced MRI of mouse brain using super-resolution reconstruction to visualize nuclei involved in higher brain function

    Plenge, E., Poole, DS., Poot, DHJ., Lakke, EAJF., Niessen, WJ., Meijering, E. & van der Weerd, L., 2014, In : NMR in Biomedicine. 27, p. 749-759 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  36. Three-dimensional registration of histology of human atherosclerotic carotid plaques to in-vivo imaging

    Groen, HC., van Walsum, T., Rozie, S., Klein, S., van Gaalen, K., Gijsen, FJH., Wielopolski, PA., Beusekom, H., de Crom, R., Verhagen, HJM., van der Steen, AFW., van der Lugt, A., Wentzel, JJ. & Niessen, WJ., 2010, In : Journal of Biomechanics. 43, p. 2087-2092 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  37. Thrombus Permeability Is Associated with Improved Functional Outcome and Recanalization in Patients with Ischemic Stroke

    Santos, E. M. M., Marquering, H. A., Den Blanken, M. D., Berkhemer, O. A., Boers, A. M. M., Yoo, A. J., Beenen, L. F., Treurniet, K. M., Wismans, C., Niessen, W. J. & More Authors, 2016, In : Stroke. 47, 3, p. 732-741

    Research output: Contribution to journalArticleScientificpeer-review

  38. Tissue segmentation of head and neck CT images for treatment planning: A multiatlas approach combined with intensity modeling

    Fortunati, V., Verhaart, RF., van der Lijn, F., Niessen, WJ., Veenland, JF., Paulides, MM. & van Walsum, T., 2013, In : Medical Physics. 40, 7, p. 1-14 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  39. Total Correlation-Based Groupwise Image Registration for Quantitative MRI

    Guyader, J. M., Huizinga, W., Fortunati, V., Poot, D. H., Kranenburg, M. V., Veenland, J. F., Paulides, M. M., Niessen, W. J. & Klein, S., 16 Dec 2016, Proceedings - 29th IEEE Conference on Computer Vision and Pattern Recognition Workshops, CVPRW 2016. IEEE, p. 626-633 8 p. 7789574

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  40. Total antioxidant capacity of the diet and major neurologic outcomes in older adults

    Devore, EE., Feskens, E., Ikram, MA., den Heijer, T., Vernooij, MW., van der Lijn, F., Hofman, A., Niessen, WJ. & Breteler, MMB., 2013, In : Neurology. 80, 5, p. 904-910 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  41. Towards a real-time minimally-invasive vascular intervention simulation system

    Alderliesten, T., Bosman, PAN. & Niessen, WJ., 2007, In : IEEE Transactions on Medical Imaging. 26, 1, p. 128-132 5 p.

    Research output: Contribution to journalArticleScientificpeer-review

  42. Towards robust CT-ultrasound registration using deep learning methods

    Sun, Y., Moelker, A., Niessen, W. J. & van Walsum, T., 2018, Understanding and Interpreting Machine Learning in Medical Image Computing Applications - First International Workshops MLCN 2018, DLF 2018, and iMIMIC 2018, Held in Conjunction with MICCAI 2018, Proceedings. Springer, Vol. 11038 LNCS. p. 43-51 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11038 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  43. Tract-specific white matter degeneration in aging. The Rotterdam study.

    de Groot, M., Ikram, MA., Akoudad, S., Krestin, GP., Hofman, A., van der Lugt, A., Niessen, WJ. & Vernooij, MW., 2014, In : Alzheimer's & Dementia. p. 1-10 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  44. Tract-specific white matter degeneration in aging: The Rotterdam Study

    de Groot, M., Ikram, MA., Akoudad, S., Krestin, GP., Hofman, A., van der Lugt, A., Niessen, WJ. & Vernooij, M. W., 2015, In : Alzheimer's & Dementia. 11, 3, p. 321-330 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  45. Tract-specific white matter microstructure and gait in humans

    Verlinden, V. J. A., De Groot, M., Cremers, L. G. M., van der Geest, J. N., Hofman, A., Niessen, W. J., Van Der Lugt, A., Vernooij, M. W. & Ikram, M. A., 1 Jul 2016, In : Neurobiology of Aging: age-related phenomena, neurodegeneration and neuropathology. 43, p. 164-173 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  46. Trajectories of imaging markers in brain aging: the Rotterdam Study

    Vinke, E. J., de Groot, M., Venkatraghavan, V., Klein, S., Niessen, W. J., Ikram, M. A. & Vernooij, M. W., 1 Nov 2018, In : Neurobiology of Aging. 71, p. 32-40 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  47. Two point minimum cost path approach for CTA coronary centerline extraction, 3D segmentation in the clinic: a grand challenge II

    Metz, CT., Schaap, M., van Walsum, T. & Niessen, WJ., 2008, Proceedings MICCAI 2008 workshop. nn (ed.). New York: MICCAI, p. 1-8 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  48. User Interaction in Semi-Automatic Segmentation of Organs at Risk: A Case Study in Radiotherapy

    Ramkumar, A., Dolz, J., Kirisli, HA., Adebahr, S., Schimek-Jasch, T., Nestle, U., Massoptier, L., Varga, E., Stappers, PJ., Niessen, WJ. & Song, Y., 2016, In : Journal of Digital Imaging. 29, 2, p. 264-277 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  49. Using GOMS and NASA-TLX to Evaluate Human-Computer Interaction Process in Interactive Segmentation

    Ramkumar, A., Stappers, P. J., Niessen, W., Adebahr, S., Schimek-Jasch, T., Nestle, U. & Song, Y., 2017, In : International Journal of Human-Computer Interaction. 33, 2, p. 123-134 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  50. Validation of Renal Artery Dimensions Measured by Magnetic Resonance Angiography in Patients Referred for Renal Sympathetic Denervation

    van Kranenburg, M., Karanasos, A., Chelu, R. G., van der Heide, E., Ouhlous, M., Nieman, K., van Mieghem, N., Krestin, G., Niessen, W., Zijlstra, F., van Geuns, R. J. & Daemen, J., 2015, In : Academic Radiology. 22, 9, p. 1106-1114

    Research output: Contribution to journalArticleScientificpeer-review

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