1. Article › Scientific › Peer-reviewed
  2. Estimating 3D lumen centerlines of carotid arteries in free-hand acquisition ultrasound

    Carvalho, DDB., Klein, S., Akkus, Z., ten Kate, GL., Schinkel, AFL., Bosch, JG., van der Lugt, A. & Niessen, WJ., 2011, In : International Journal of Computer Assisted Radiology and Surgery. p. 1-9 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  3. Evaluation framework for carotid bifurcation lumen segmentation and stenosis grading

    Hameeteman, K., Zuluaga, MA., Freiman, M., Joiskowicz, L., Cuisenaire, O., Florez Valencia, L., Gulsun, MA., Krissian, K., Mille, J., Wong, WCK., Orkisz, M., Tek, H., Hernandez Hoyos, M., Benmansour, F., Chung, ACS., Rozie, S., van Gils, MJ., van der Borne, L., Sosna, J., Berman, P. & 10 othersCohen, N., Douek, P., Sanchez, I., Aissat, M., Schaap, M., Metz, C., Krestin, GP., van der Lugt, A., Niessen, WJ. & van Walsum, T., 2011, In : Medical Image Analysis. 8, p. 477-488 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  4. Evaluation of 2D and 3D ultrasound tracking algorithms and impact on ultrasound-guided liver radiotherapy margins

    De Luca, V., Banerjee, J., Hallack, A., Kondo, S., Makhinya, M., Nouri, D., Royer, L., Cifor, A., Niessen, W. J., van Walsum, T. & More Authors, 2018, In : Medical Physics. 45, 11, p. 4986 5003 p.

    Research output: Contribution to journalArticleScientificpeer-review

  5. Evaluation of a multi-atlas based method for segmentation of cardiac CTA data: a large-scale, multi-center and multi-vendor study

    Kirisli, HA., Schaap, M., Klein, S., Papadopoulou, SL., Bonardi, ML., Chen, CH., Weustink, AC., Mollet, NRA., Vonken, E. P. A., van der Geest, R. J., van Walsum, T. & Niessen, WJ., 2010, In : Medical Physics. 37, p. 6279-6292 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  6. Exome Chip Analysis Identifies Low-Frequency and Rare Variants in MRPL38 for White Matter Hyperintensities on Brain Magnetic Resonance Imaging

    Jian, X., Satizabal, C. L., Smith, A. V., Wittfeld, K., Bis, J. C., Hsu, F-C., Nho, K., Li, S., Niessen, W. J. & More Authors, 2018, In : Stroke. 49, 8, p. 1812-1819

    Research output: Contribution to journalArticleScientificpeer-review

  7. Exome-sequencing in a large population-based study reveals a rare Asn396Ser variant in the LIPG gene associated with depressive symptoms

    Amin, N., Jovanova, O., Adams, H., Dehghan, A., Kavousi, M., Vernooij, M. W., Peeters, R. P., De Vrij, F. M. S., Van Der Lee, S. J., Van Rooij, J. G. J., Van Leeuwen, E. M., Chaker, L., Demirkan, A., Hofman, A., Brouwer, R. W. W., Kraaij, R., Willems Van DIjk, K., Hankemeier, T., Van Ijcken, W. F. J., Uitterlinden, A. G. & 6 othersNiessen, W. J., Franco, O. H., Kushner, S. A., Ikram, M. A., Tiemeier, H. & Van Duijn, C. M., 1 Apr 2017, In : Molecular Psychiatry. 22, 4, p. 537-543 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  8. Facilitating Tumor Functional Assessment by Spatially Relating 3D Tumor Histology and In Vivo MRI: Image Registration Approach

    Alic, L., Haeck, JC., Bol, K., Klein, S., van Tiel, ST., Wielepolski, PA., de Jong, M., Niessen, WJ., Bernsen, MR. & Veenland, JF., 2011, In : PLoS ONE. 6, 8

    Research output: Contribution to journalArticleScientificpeer-review

  9. Fast en robust 3D ultrasound registration - block and game theoretic matching

    Banerjee, J., Klink, SJC., Peters, ED., Niessen, WJ., Moelker, A. & van Walsum, T., 2015, In : Medical Image Analysis. 20, 1, p. 173-183 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  10. Fast noise reduction in computed tomography for improved 3-D visualization

    Schaap, M., Schilham, AM., Zuiderveld, KJ., Prokop, M., Vonken, EJ. & Niessen, WJ., 2008, In : IEEE Transactions on Medical Imaging. 27, 8, p. 1120-1129 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  11. Feasibility of multi-modal deformable registration for head and neck tumor treatment planning

    Fortunati, VF., Verhaart, RF., Angeloni, F., van der Lugt, A., Niessen, WJ., Veenland, JF., Paulides, M. & van Walsum, T., 2014, In : International Journal of Radiation: Oncology - Biology - Physics. 90, p. 85-93 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  12. Feature selection based on the SVM weight vector for classification of dementia

    Bron, EE., Smits, M., Niessen, WJ. & Klein, S., 2015, In : IEEE Journal of Biomedical and Health Informatics. 19, 5, p. 1617-1626 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  13. Fine-mapping the effects of Alzheimer's disease risk loci on brain morphology

    Roshchupkin, G. V., Adams, H. H., van der Lee, S. J., Vernooij, M. W., van Duijn, C. M., Uitterlinden, A. G., van der Lugt, A., Hofman, A., Niessen, W. J. & Ikram, M. A., 1 Dec 2016, In : Neurobiology of Aging: age-related phenomena, neurodegeneration and neuropathology. 48, p. 204-211 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  14. Free-form deformation using lower-order B-spline for nonrigid image registration

    Sun, W., Niessen, WJ. & Klein, S., 2014, In : Lecture Notes in Computer Science. 8673, PART 1, p. 194-201 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  15. Full exploitation of high dimensionality in brain imaging: The JPND working group statement and findings

    Adams, H. H. H., Roshchupkin, G. V., DeCarli, C., Franke, B., Grabe, H. J., Habes, M., Jahanshad, N., Medland, S. E., Niessen, W. & More Authors, 2019, In : Alzheimer's and Dementia: Diagnosis, Assessment and Disease Monitoring. 11, p. 286-290 5 p.

    Research output: Contribution to journalArticleScientificpeer-review

  16. Fully automated carotid plaque segmentation in combined contrast enhanced and B-mode ultrasound

    Akkus, Z., Carvalho, DDB., van den Oord, SCH., Schinkel, AFL., Niessen, WJ., de Jong, N., van der Steen, AFW., Klein, S. & Bosch, JG., 2015, In : Ultrasound in Medicine & Biology. 41, 2, p. 517-531 15 p.

    Research output: Contribution to journalArticleScientificpeer-review

  17. Fully automatic nonrigid registration-based local motion estimation for motion-corrected iterative cardiac CT reconstruction

    Isola, AA., Grass, M. & Niessen, WJ., 2010, In : Medical Physics. 37, p. 1093-1109 17 p.

    Research output: Contribution to journalArticleScientificpeer-review

  18. Fusion of fibrous cap thickness and wall shear stress to assess plaque vulnerability in coronary arteries: a pilot study

    Zahnd, G., Schrauwen, J., Karanasos, A., Regar, E., Niessen, W., van Walsum, T. & Gijsen, F., 2016, In : International Journal of Computer Assisted Radiology and Surgery. 11, 10, p. 1779-1790

    Research output: Contribution to journalArticleScientificpeer-review

  19. GENETIC VARIATION UNDERLYING COGNITION AND ITS RELATION WITH NEUROLOGICAL OUTCOMES

    Kool, M. J., Cremers, L. G. M., Heshmatollah, A., Ikram, M. K., Uiterlinden, A. G., van Duijn, C. M., Niessen, W., Vernooij, M. W., Arfan Ikram, M. & Adams, H. H. H., 2018, In : Alzheimer's and Dementia: Translational Research and Clinical Interventions. 14, 7, p. P1652-P1653

    Research output: Contribution to journalArticleScientificpeer-review

  20. Genetic architecture of subcortical brain structures in 38,851 individuals

    Satizabal, C. L., Adams, H. H. H., Arfan Ikram, M. & Niessen, W., 2019, In : Nature Genetics. 51, 11, p. 1624-1636

    Research output: Contribution to journalArticleScientificpeer-review

  21. Genetic determination of human facial morphology: links between cleft-lips and normal variation

    Boehringer, S., van der Lijn, F., Liu, F., Gunther, S., Sinigerova, S., Nowak, S., Ludwig, KU., Herberz, R., Klein, S., Hofman, A., Uitterlinden, AG., Niessen, WJ., Breteler, MMB., van der Lugt, A., Wurtz, RP., Nothen, MM., Horsthemke, B., Wieczorek, D., Mangold, E. & Kayser, M., 2011, In : European Journal of Human Genetics. 19, p. 1192-1197 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  22. Genetic risk factors for cerebral small vessel disease in hypertensive patients from a genetically isolated population

    Schuur, M., van Swieten, JC., Schol-Gelok, S., Ikram, MA., Niessen, WJ., Vernooij, M. W., Liu, F., Isaacs, A., Boer, R., de Koning, I., Vrooman, HA., Oostra, BA., van der Lugt, A., Breteler, MMB. & van Duijn, CM., 2011, In : Journal of Neurology, Neurosurgery and Psychiatry. 82, p. 41-44 4 p.

    Research output: Contribution to journalArticleScientificpeer-review

  23. Genetic susceptibility to multiple sclerosis: Brain structure and cognitive function in the general population

    Ikram, M. A., Vernooij, M. W., Roshchupkin, G. V., Hofman, A., van Duijn, C. M., Uitterlinden, A. G., Niessen, W. J., Hintzen, R. Q. & Adams, H. H., 1 Nov 2017, In : Multiple Sclerosis. 23, 13, p. 1697-1706 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  24. Genetic variation underlying cognition and its relation with neurological outcomes and brain imaging

    Knol, M. J., Heshmatollah, A., Cremers, L. G. M., Ikram, M. K., Uitterlinden, A. G., van Duijn, C. M., Niessen, W. J., Vernooij, M. W., Ikram, M. A. & Adams, H. H. H., 2019, In : Aging. 11, 5, p. 1440-1456

    Research output: Contribution to journalArticleScientificpeer-review

  25. Global and focal brain volume in long-term breast cancer survivors exposed to adjuvant chemotherapy

    Koppelmans, V., de Ruiter, MB., van der Lijn, F., Boogerd, W., Seynaeve, C., van der Lugt, A., Vrooman, HA., Niessen, WJ., Breteler, MMB. & Schagen, SB., 2012, In : Breast Cancer Research and Treatment. 132, p. 1099-1106 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  26. Global and focal white matter integrity in breast cancer survivors 20 years after adjuvant chemotherapy

    Koppelmans, V., de Groot, M., de Ruiter, MB., Boogerd, W., Seynaeve, C., Vernooij, MW., Niessen, WJ., Schagen, SB. & Breteler, MMB., 2014, In : Human Brain Mapping. 35, p. 889-899 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  27. Gray Matter Age Prediction as a Biomarker for Risk of Dementia

    Wang, J., Knol, M. J., Tiulpin, A., Dubost, F., de Bruijne, M., Vernooij, M. W., Adams, H. H. H., Ikram, M. A., Niessen, W. J. & Roshchupkin, G. V., 15 Oct 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 42, p. 21213-21218

    Research output: Contribution to journalArticleScientificpeer-review

  28. Gray matter heritability in family-based and population-based studies using voxel-based morphometry

    van der Lee, S. J., Roshchupkin, G. V., Adams, H. H., Schmidt, H., Hofer, E., Saba, Y., Schmidt, R., Hofman, A., Amin, N., van Duijn, C. M., Vernooij, M. W., Ikram, M. A. & Niessen, W. J., 1 May 2017, In : Human Brain Mapping. 38, 5, p. 2408-2423 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  29. Groupwise image registration based on a total correlation dissimilarity measure for quantitative MRI and dynamic imaging data

    Guyader, J. M., Huizinga, W., Poot, D. H. J., van Kranenburg, M., Uitterdijk, A., Niessen, W. J. & Klein, S., 2018, In : Scientific Reports. 8, 1, 14 p., 13112.

    Research output: Contribution to journalArticleScientificpeer-review

  30. Groupwise multichannel image registration

    Guyader, J. M., Huizinga, W., Fortunati, V., Poot, D. H. J., Veenland, J. F., Paulides, M. M., Niessen, W. J. & Klein, S., 2019, In : IEEE Journal of Biomedical and Health Informatics. 23, 3, p. 1171-1180 8373696.

    Research output: Contribution to journalArticleScientificpeer-review

  31. HASE: Framework for efficient high-dimensional association analyses

    Roshchupkin, G. V., Adams, H. H. H., Vernooij, M. W., Hofman, A., Van Duijn, C. M., Ikram, M. A. & Niessen, W. J., 26 Oct 2016, In : Scientific Reports. 6, 36076.

    Research output: Contribution to journalArticleScientificpeer-review

  32. Heritability of the shape of subcortical brain structures in the general population

    Roshchupkin, G. V., Gutman, B. A., Vernooij, M. W., Jahanshad, N., Martin, N. G., Hofman, A., McMahon, K. L., Van Der Lee, S. J., van Duijn, C. M., De Zubicaray, G. I., Uitterlinden, A. G., Wright, M. J., Niessen, W. J., Thompson, P. M., Ikram, M. A. & Adams, H. H., 15 Dec 2016, In : Nature Communications. 7, 13738.

    Research output: Contribution to journalArticleScientificpeer-review

  33. Heterogeneity in DCE-MRI parametric maps: a biomarker for treatment response?

    Alic, L., van Vliet, M., Dijke, CF., Eggermont, AMM., Veenland, JF. & Niessen, WJ., 2011, In : Physics in Medicine and Biology. 56, p. 1601-1616 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  34. High Blood Pressure and Cerebral White Matter Lesion Progression in the General Population

    Verhaaren, BFJ., Vernooij, MW., Boer, R. D., Hofman, A., Niessen, WJ., van der Lugt, A. & Ikram, MA., 2013, In : Hypertension. 61, 6, p. 1354-1359 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  35. High-Dimensional Mapping of Cognition to the Brain Using Voxel-Based Morphometry and Subcortical Shape Analysis

    Zonneveld, H. I., Roshchupkin, G. V., Adams, H. H. H., Gutman, B. A., Van Der Lugt, A., Niessen, W., Vernooij, M. W. & Ikram, M. A., 2019, In : Journal of Alzheimer's Disease. 71, 1, p. 141-152

    Research output: Contribution to journalArticleScientificpeer-review

  36. Hippocampal shape is predictive for the development of dementia in a normal, elderly population

    Achterberg, HC., van der Lijn, F., den Heijer, T., Vernooij, MW., Ikram, MA., Niessen, WJ. & Bruijne, M. D., 2014, In : Human Brain Mapping. 35, p. 2359-2371 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  37. Hippocampus segmentation in MR images using atlas registration, voxel classification, and graph cuts

    van der Lijn, F., den Heijer, T., Breteler, MMB. & Niessen, WJ., 2008, In : NeuroImage. 43, 4, p. 708-720 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  38. Histogram-based selective deblurring to improve CT imaging of calcifications

    Rollano-Hijarrubia, E., Niessen, WJ., Weinans, H., van der Lugt, A. & Stokking, R., 2007, In : Investigative Radiology: a journal of clinical and laboratory research. 42, 1, p. 8-22 15 p.

    Research output: Contribution to journalArticleScientificpeer-review

  39. IT Infrastructure to Support the Secondary Use of Routinely Acquired Clinical Imaging Data for Research

    Leung, KYE., van der Lijn, F., Vrooman, HA., Sturkenboom, MCJM. & Niessen, WJ., 2014, In : NeuroInformatics. p. 1-17 17 p.

    Research output: Contribution to journalArticleScientificpeer-review

  40. IT infrastructure to support the secondary use of routinely acquired clinical imaging data for research

    Leung, KYE., van der Lijn, F., Vrooman, HA., Sturkenboom, MCJM. & Niessen, WJ., 2015, In : NeuroInformatics. 13, 1, p. 65-81 17 p.

    Research output: Contribution to journalArticleScientificpeer-review

  41. Image registration improves human knee cartilage T1 mapping with delayed gadolinium-enhanced MRI of cartilage (dGEMRIC)

    Bron, EE., Tiel, J., Smit, H., Poot, DHJ., Niessen, WJ., Krestin, GP., Weinans, HH., Oei, E., Kotek, G. & Klein, S., 2013, In : European Radiology. 23, 1, p. 246-252 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  42. Image-guided vascular neurosurgery based on three-dimensional rotational angiography - Technical note

    Willems, PWA., van Walsum, T., Woerdeman, PA., van de Kraats, E. B., de Kort, GAP., Niessen, WJ. & van der Sprenkel, JWB., 2007, In : Journal of Neurosurgery. 106, 3, p. 510-506 3 p.

    Research output: Contribution to journalArticleScientificpeer-review

  43. Imaging of Small High-Density Structures in CT: A Phantom Study

    Rollano-Hijarrubia, E., Stokking, R., van der Meer, F. & Niessen, WJ., 2006, In : Academic Radiology. 13, 7, p. 893-908 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  44. Improving alignment in Tract-based spatial statistics: Evaluation and optimization of image registration

    de Groot, M., Vernooij, MW., Klein, S., Arfan Ikram, M., Vos, FM., Smith, SM., Niessen, WJ. & Andersson, JLR., 2013, In : NeuroImage. 76, p. 400-411 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  45. Incidence, treatment, and case-fatality of non-traumatic subarachnoid haemorrhage in the Netherlands

    Risselada, R., de Vries, LM., Dippel, DWJ., van Kooten, F., van der Lugt, A., Niessen, WJ., Firouzian, A., Stricker, BH. & Sturkenboom, MCJM., 2011, In : Clinical Neurology and Neurosurgery. 113, 6, p. 483-487 5 p.

    Research output: Contribution to journalArticleScientificpeer-review

  46. Incidental findings on brain MRI in the general population

    Vernooij, M. W., Ikram, MA., Tanghe, HL., Vincent, AJPE., Hofman, A., Krestin, GP., Niessen, WJ., Breteler, MMB. & van der Lugt, A., 2007, In : New England Journal of Medicine. 357, 18, p. 1821-1828 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  47. Independent Multiple Factor Association Analysis for Multiblock Data in Imaging Genetics

    Vilor-Tejedor, N., Ikram, M. A., Roshchupkin, G. V., Cáceres, A., Alemany, S., Vernooij, M. W., Niessen, W. J., van Duijn, C. M., Adams, H. H. & More Authors, 2019, In : NeuroInformatics. 17, 4, p. 583-592 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  48. Influence of image registration on apparent diffusion coefficient images computed from fee-breathing diffusion MR images of the abdomen

    Guyader, J-M., Bernardin, L., Douglas, NHM., Poot, DHJ., Niessen, WJ. & Klein, S., 2014, In : Journal of Magnetic Resonance. p. 1-16 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  49. Influence of image registration on apparent diffusion coefficient images computed from free-breathing diffusion MR images of the abdomen

    Guyader, J-M., Bernardin, L., Douglas, NHM., Poot, DHJ., Niessen, WJ. & Klein, S., 2015, In : Journal of Magnetic Resonance Imaging. 42, 2, p. 315-330 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  50. Integrated analysis and visualization of group differences in structural and functional brain connectivity: Applications in typical ageing and schizophrenia

    Langen, CD., White, T., Ikram, MA., Vernooij, MW. & Niessen, WJ., 2015, In : PLoS ONE. 10, 9, art.nr. e0137484, p. 1-25 25 p.

    Research output: Contribution to journalArticleScientificpeer-review

  51. Interactive local super-resolution reconstruction of whole-body MRI mouse data: A pilot study with applications to bone and kidney metastases

    Dzyubachyk, O., Khmelinskii, A., Plenge, E., Kok, P., Snoeks, TJA., Poot, DHJ., Lowik, CWGM., Botha, CP., Niessen, WJ., van der Weerd, L., Meijering, E. & Lelieveldt, BPF., 2014, In : PLoS ONE. 9, 9, p. 1-10 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

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