1. 2019
  2. Radiomics approach to distinguish between well differentiated liposarcomas and lipomas on MRI

    Vos, M., Starmans, M. P. A., Timbergen, M. J. M., van der Voort, S. R., Padmos, G. A., Kessels, W., Niessen, W. J., van Leenders, G. J. L. H., Grünhagen, D. J., Sleijfer, S., Verhoef, C., Klein, S. & Visser, J. J., 1 Dec 2019, In : British Journal of Surgery. 106, 13, p. 1800-1809 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  3. Gray Matter Age Prediction as a Biomarker for Risk of Dementia

    Wang, J., Knol, M. J., Tiulpin, A., Dubost, F., de Bruijne, M., Vernooij, M. W., Adams, H. H. H., Ikram, M. A., Niessen, W. J. & Roshchupkin, G. V., 15 Oct 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 42, p. 21213-21218

    Research output: Contribution to journalArticleScientificpeer-review

  4. 3D regression neural network for the quantification of enlarged perivascular spaces in brain MRI

    Dubost, F., Adams, H., Bortsova, G., Ikram, M. A., Niessen, W., Niessen, W., Vernooij, M., de Bruijne, M. & de Bruijne, M., 2019, In : Medical Image Analysis. 51, p. 89-100

    Research output: Contribution to journalArticleScientificpeer-review

  5. A Hybrid Deep Learning Framework for Integrated Segmentation and Registration: Evaluation on Longitudinal White Matter Tract Changes

    Li, B., Niessen, W., Klein, S., de Groot, M., Arfan Ikram, M., Vernooij, M. & Bron, E. E., 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 . Shen, D., Liu, T., Peters, T. M., Staib, L. H., Essert, C., Zhou, S., Yap, P-T. & Khan, A. (eds.). Springer, p. 645-653 (Lecture Notes in Computer Science ; vol. 11766).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  6. A genome-wide association study identifies genetic loci associated with specific lobar brain volumes

    van der Lee, S. J., Knol, M. J., Chauhan, G., Satizabal, C. L., Smith, A. V., Hofer, E., Bis, J. C., van den Akker, E. B., Niessen, W. J. & More Authors, 2019, In : Communications Biology. 2, 1, p. 1-9 9 p., 285.

    Research output: Contribution to journalArticleScientificpeer-review

  7. Automated Lesion Detection by Regressing Intensity-Based Distance with a Neural Network

    van Wijnen, K. M. H., Dubost, F., Yilmaz, P., Ikram, M. A., Niessen, W., Adams, H., Vernooij, M. W. & de Bruijne, M., 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 . Shen, D. (ed.). Springer, p. 234-242 (Lecture Notes in Computer Science; vol. 11767).

    Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

  8. Automated Quantification of Enlarged Perivascular Spaces in Clinical Brain MRI across Sites

    Dubost, F., Dünnwald, M., Huff, D., Scheurmann, V., Schreiber, F., Vernooij, M. W., Niessen, W., Skalej, M., Schreiber, S. & More Authors, 2019, Proceedings of 2nd International Workshop on Context-Aware Surgical Theaters,OR 2.0 Context-Aware Operating Theaters and Machine Learning in Clinical Neuroimaging, MLCN 2019. Zhou, L., Sarikaya, D., Kia, S. M., Speidel, S., Malpani, A., Hashimoto, D., Habes, M., Löfstedt, T., Ritter, K. & Wang, H. (eds.). Springer Verlag, p. 103-111 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11796 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  9. Clinical value of cerebrospinal fluid neurofilament light chain in semantic dementia

    Meeter, L. H. H., Steketee, R. M. E., Salkovic, D., Vos, M. E., Grossman, M., McMillan, C. T., Niessen, W. J., Papma, J. M., De Jong, F. J. & More Authors, 2019, In : Journal of Neurology, Neurosurgery and Psychiatry. 90, 9, p. 997-1004 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  10. Cognitive functioning in patients with disorders along the heart-brain axis: the role of cerebral blood flow

    Leeuwis, A. E., Hooghiemstra, A. M., Bron, E. E., Kuipers, S., Oudeman, E. A., Kalay, T., Brunner-La-Rocco, H-P. H. P., Kappelle, L. J., Niessen, W. & More Authors, 2019, p. 755.

    Research output: Contribution to conferenceAbstractScientific

  11. Detection of mild cognitive impairment in a community-dwelling population using quantitative, multiparametric MRI-based classification

    Bouts, M. J. R. J., van der Grond, J., Vernooij, M. W., Koini, M., Schouten, T. M., de Vos, F., Feis, R. A., Lechner, A., Niessen, W. J. & More Authors, 2019, In : Human Brain Mapping. 40, 9, p. 2711-2722 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  12. Disease progression timeline estimation for Alzheimer's disease using discriminative event based modeling

    Venkatraghavan, V., Bron, E. E., Niessen, W. J. & Klein, S., 2019, In : NeuroImage. 186, p. 518-532

    Research output: Contribution to journalArticleScientificpeer-review

  13. Enlarged perivascular spaces in brain MRI: Automated quantification in four regions

    Dubost, F., Yilmaz, P., Adams, H., Bortsova, G., Ikram, M. A., Niessen, W., Vernooij, M. & de Bruijne, M., 2019, In : NeuroImage. 185, p. 534-544

    Research output: Contribution to journalArticleScientificpeer-review

  14. Event-Based Modeling with High-Dimensional Imaging Biomarkers for Estimating Spatial Progression of Dementia

    Venkatraghavan, V., Dubost, F., Bron, E. E., Niessen, W. J., de Bruijne, M. & Klein, S., 2019, Information Processing in Medical Imaging - 26th International Conference, IPMI 2019, Proceedings. Chung, A. C. S., Gee, J. C., Yushkevich, P. A. & Bao, S. (eds.). Springer Verlag, Vol. 11492. p. 169-180 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11492 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  15. Full exploitation of high dimensionality in brain imaging: The JPND working group statement and findings

    Adams, H. H. H., Roshchupkin, G. V., DeCarli, C., Franke, B., Grabe, H. J., Habes, M., Jahanshad, N., Medland, S. E., Niessen, W. & More Authors, 2019, In : Alzheimer's and Dementia: Diagnosis, Assessment and Disease Monitoring. 11, p. 286-290 5 p.

    Research output: Contribution to journalArticleScientificpeer-review

  16. Genetic architecture of subcortical brain structures in 38,851 individuals

    Satizabal, C. L., Adams, H. H. H., Arfan Ikram, M. & Niessen, W., 2019, In : Nature Genetics. p. 1624-1636

    Research output: Contribution to journalArticleScientificpeer-review

  17. Genetic variation underlying cognition and its relation with neurological outcomes and brain imaging

    Knol, M. J., Heshmatollah, A., Cremers, L. G. M., Ikram, M. K., Uitterlinden, A. G., van Duijn, C. M., Niessen, W. J., Vernooij, M. W., Ikram, M. A. & Adams, H. H. H., 2019, In : Aging. 11, 5, p. 1440-1456

    Research output: Contribution to journalArticleScientificpeer-review

  18. Groupwise multichannel image registration

    Guyader, J. M., Huizinga, W., Fortunati, V., Poot, D. H. J., Veenland, J. F., Paulides, M. M., Niessen, W. J. & Klein, S., 2019, In : IEEE Journal of Biomedical and Health Informatics. 23, 3, p. 1171-1180 8373696.

    Research output: Contribution to journalArticleScientificpeer-review

  19. High-Dimensional Mapping of Cognition to the Brain Using Voxel-Based Morphometry and Subcortical Shape Analysis

    Zonneveld, H. I., Roshchupkin, G. V., Adams, H. H. H., Gutman, B. A., Van Der Lugt, A., Niessen, W., Vernooij, M. W. & Ikram, M. A., 2019, In : Journal of Alzheimer's Disease. 71, 1, p. 141-152

    Research output: Contribution to journalArticleScientificpeer-review

  20. Hydranet: Data augmentation for regression neural networks

    Dubost, F., Bortsova, G., Adams, H., Ikram, M. A., Niessen, W., Vernooij, M. & de Bruijne, M., 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings. Shen, D., Yap, P-T., Liu, T., Peters, T. M., Khan, A., Staib, L. H., Essert, C. & Zhou, S. (eds.). Springer, p. 438-446 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11767 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  21. Independent Multiple Factor Association Analysis for Multiblock Data in Imaging Genetics

    Vilor-Tejedor, N., Ikram, M. A., Roshchupkin, G. V., Cáceres, A., Alemany, S., Vernooij, M. W., Niessen, W. J., van Duijn, C. M., Adams, H. H. & More Authors, 2019, In : NeuroInformatics. 17, 4, p. 583-592 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  22. Multiple-correlation similarity for block-matching based fast CT to ultrasound registration in liver interventions

    Banerjee, J., Sun, Y., Klink, C., Gahrmann, R., Niessen, W. J., Moelker, A. & van Walsum, T., 2019, In : Medical Image Analysis. 53, p. 132-141

    Research output: Contribution to journalArticleScientificpeer-review

  23. Mutation stratification of desmoid-type fibromatosis using a radiogenomics approach

    Timbergen, M., Starmans, M. P. A., Vos, M., Padmos, G. A., Grünhagen, D. J., van Leenders, G. J. L. H., Verhoef, C., Niessen, W., Sleijfer, S. & More Authors, 2019, In : European Journal of Surgical Oncology. 44, 2, p. e16

    Research output: Contribution to journalMeeting AbstractScientific

  24. Normative brain volumetry derived from different reference populations: impact on single-subject diagnostic assessment in dementia

    Vinke, E. J., Huizinga, W., Bergtholdt, M., Adams, H. H., Steketee, R. M. E., Papma, J. M., De Jong, F. J., Niessen, W. J., Ikram, M. A. & More Authors, 2019, In : Neurobiology of Aging. 84, p. 9-16

    Research output: Contribution to journalArticleScientificpeer-review

  25. Orientation Prior and Consistent Model Selection Increase Sensitivity of Tract-Based Spatial Statistics in Crossing-Fiber Regions

    Arkesteijn, J., Poot, D., Ikram, M. A., Niessen, W., van Vliet, L., Vernooij, M. W. & Vos, F., 2019, In : IEEE Transactions on Medical Imaging. 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  26. Patterns of functional connectivity in an aging population: The Rotterdam Study

    Zonneveld, H. I., Pruim, R. HR., Bos, D., Vrooman, H. A., Muetzel, R. L., Hofman, A., Rombouts, S. ARB., van der Lugt, A., Niessen, W. J. & More Authors, 2019, In : NeuroImage. 189, p. 432-444

    Research output: Contribution to journalArticleScientificpeer-review

  27. Predicting brain age as a biomarker for risk of dementia

    Wang, J., Knol, M. J., Tiulpin, A., Dubost, F., de Bruijne, M., Vernooij, M. W., Adams, H. H. H., Ikram, M. A., Niessen, W. & Roshchupkin, G. V., 2019, In : Alzheimer Disease and Associated Disorders. 15, 7, p. P537-P538

    Research output: Contribution to journalMeeting AbstractScientific

  28. Spatially regularized shape analysis of the hippocampus using P-spline based shape regression

    Achterberg, H. C., de Rooi, J., Vernooij, M. W., Arfan Ikram, M., Niessen, W., Eilers, P. & de Bruijne, M., 2019, In : IEEE Journal of Biomedical and Health Informatics. 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  29. The value of hippocampal volume, shape, and texture for 11-year prediction of dementia: a population-based study

    Achterberg, H. C., Sørensen, L., Wolters, F. J., Niessen, W. J., Vernooij, M. W., Ikram, M. A., Nielsen, M. & de Bruijne, M., 2019, In : Neurobiology of Aging. 81, p. 58-66

    Research output: Contribution to journalArticleScientificpeer-review

  30. 2018
  31. Trajectories of imaging markers in brain aging: the Rotterdam Study

    Vinke, E. J., de Groot, M., Venkatraghavan, V., Klein, S., Niessen, W. J., Ikram, M. A. & Vernooij, M. W., 1 Nov 2018, In : Neurobiology of Aging. 71, p. 32-40 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  32. Ensemble landmarking of 3D facial surface scans

    De Jong, M. A., Hysi, P., Spector, T., Niessen, W., Koudstaal, M. J., Wolvius, E. B., Kayser, M. & Böhringer, S., 8 Jan 2018, In : Scientific Reports. 8, 1, 12.

    Research output: Contribution to journalArticleScientificpeer-review

  33. Age-dependent association of thyroid function with brain morphology and microstructural organization: Evidence from brain imaging

    Chaker, L., Cremers, L. G. M., Korevaar, T. I. M., De Groot, M., Dehghan, A., Franco, O. H., Niessen, W. J., Ikram, M. A., Peeters, R. P. & Vernooij, M. W., 1 Jan 2018, In : Neurobiology of Aging: age-related phenomena, neurodegeneration and neuropathology. 61, p. 44-51 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  34. Averaged stochastic optimization for medical image registration based on variance reduction

    Sun, W., Poot, D. H. J., Yang, X., Niessen, W. J. & Klein, S., 1 Jan 2018, Biomedical Image Registration - 8th International Workshop, WBIR 2018, Proceedings. Klein, S., Sommer, S., Durrleman, S. & Staring, M. (eds.). Springer Verlag, Vol. 10883 LNCS. p. 69-79 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10883 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  35. White-matter microstructure and hearing acuity in older adults: a population-based cross-sectional DTI study

    Rigters, S. C., Cremers, L. G. M., Ikram, M. A., van der Schroeff, M. P., De Groot, M., Roshchupkin, G. V., Niessen, W. J. N., Baatenburg de Jong, R. J., Goedegebure, A. & Vernooij, M. W., 1 Jan 2018, In : Neurobiology of Aging: age-related phenomena, neurodegeneration and neuropathology. 61, p. 124-131 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  36. A spatio-temporal reference model of the aging brain

    huizinga, W., Poot, D., Vernooij, M. W., Roshchupkin, G. V., bron, E. E., Ikram, M. A., Rueckert, D., Niessen, W. & Klein, S., 2018, In : NeuroImage. 169, p. 11-22

    Research output: Contribution to journalArticleScientificpeer-review

  37. Added value of multiphase CTA imaging for thrombus perviousness assessment

    Santos, E. M. M., D’Esterre, C. D., Treurniet, K. M., Niessen, W. J., Abou Najm, M., Goyal, M., Demchuk, A. M., Majoie, C. B. L. M., Menon, B. K. & Marquering, H. A., 2018, In : Neuroradiology: a journal devoted to neuroimaging and interventional neuroradiology. 60, 1, p. 71-79

    Research output: Contribution to journalArticleScientificpeer-review

  38. Aortic stiffness and brain integrity in elderly patients with cognitive and functional complaints

    Tap, L., van Opbroek, A., Niessen, W. J., Smits, M. & Mattace-Raso, F. U. S., 2018, In : CLINICAL INTERVENTIONS IN AGING. 13, p. 2161-2167

    Research output: Contribution to journalArticleScientificpeer-review

  39. Automatic normative quantification of brain tissue volume to support the diagnosis of dementia: A clinical evaluation of diagnostic accuracy

    Vernooij, M. W., Jasperse, B., Steketee, R., Koek, M., Vrooman, H., Ikram, M. A., Papma, J., van der Lugt, A., Smits, M. & Niessen, W. J., 2018, In : NeuroImage: Clinical. 20, p. 374-379 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  40. Brain Volumes and Longitudinal Cognitive Change: A Population-based Study

    Vibha, D., Tiemeier, H., Mirza, S. S., Adams, H. H., Niessen, W. J., Hofman, A., Prasad, K., van der Lugt, A., Vernooij, M. W. & Ikram, M. A., 2018, In : Alzheimer Disease and Associated Disorders. 32, 1, p. 43-49

    Research output: Contribution to journalArticleScientificpeer-review

  41. C-Reactive Protein, Plasma Amyloid-β Levels, and Their Interaction With Magnetic Resonance Imaging Markers

    Hilal, S., Ikram, M. A., Verbeek, M. M., Franco, O. H., Stoops, E., Vanderstichele, H., Niessen, W. J. & Vernooij, M. W., 2018, In : Stroke. 49, 11, p. 2692-2698

    Research output: Contribution to journalArticleScientificpeer-review

  42. Cerebellar growth impairment characterizes school-aged children born preterm without perinatal brain lesions

    Pieterman, K., White, T. J., Van Den Bosch, G. E., Niessen, W. J., Reiss, I. K. M., Tibboel, D., Hoebeek, F. E. & Dudink, J., 2018, In : American Journal of Neuroradiology. 39, 5, p. 956-962 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  43. Classification of malignant and benign liver tumors using a radiomics approach

    Starmans, M. P. A., Miclea, R. L., Van Der Voort, S. R., Niessen, W. J., Thomeer, M. G. & Klein, S., 2018, Medical Imaging 2018: Image Processing. SPIE, Vol. 10574. 105741D

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  44. Contrast-enhancement influences skeletal muscle density, but not skeletal muscle mass, measurements on computed tomography

    van Vugt, J. L. A., Coebergh van den Braak, R. R. J., Schippers, H. J. W., Veen, K. M., Levolger, S., de Bruin, R. W. F., Koek, M., Niessen, W. J., IJzermans, J. N. M. & Willemsen, F. E. J. A., 2018, In : Clinical Nutrition. 37, 5, p. 1707-1714

    Research output: Contribution to journalArticleScientificpeer-review

  45. Differential patterns of age-related cortical and subcortical functional connectivity in 6-to-10 year old children: A connectome-wide association study

    Langen, C. D., Muetzel, R., Blanken, L., van der Lugt, A., Tiemeier, H., Verhulst, F., Niessen, W. J. & White, T., 2018, In : Brain and Behavior. 8, 8, 15 p., e01031.

    Research output: Contribution to journalArticleScientificpeer-review

  46. Disconnection due to white matter hyperintensities is associated with lower cognitive scores

    Langen, C. D., Cremers, L. G. M., de Groot, M., White, T., Ikram, M. A., Niessen, W. J. & Vernooij, M. W., 2018, In : NeuroImage. 183, p. 745-756

    Research output: Contribution to journalArticleScientificpeer-review

  47. Do volume, height and width of the eye determine refractive error? Results from 10-year-old European children from the Generation R Study.

    Tideman, W., Marstal, K., Polling, J. R., Jaddoe, V., Vernooij, M., van der Lugt, A., Niessen, W., Poot, D. & Klaver, C. C. W., 2018, In : Investigative Ophthalmology & Visual Science. 59, 9

    Research output: Contribution to journalMeeting AbstractScientific

  48. End-to-end diagnosis and segmentation learning from cardiac magnetic resonance imaging

    Snaauw, G., Gong, D., Maicas, G., van den Hengel, A., Niessen, W., Verjans, J. & Carneiro, G., 2018, ISBI 2019 - 2019 IEEE International Symposium on Biomedical Imaging. IEEE, p. 802-805 4 p. 8759276

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  49. Evaluation of 2D and 3D ultrasound tracking algorithms and impact on ultrasound-guided liver radiotherapy margins

    De Luca, V., Banerjee, J., Hallack, A., Kondo, S., Makhinya, M., Nouri, D., Royer, L., Cifor, A., Niessen, W. J., van Walsum, T. & More Authors, 2018, In : Medical Physics. 45, 11, p. 4986 5003 p.

    Research output: Contribution to journalArticleScientificpeer-review

  50. Exome Chip Analysis Identifies Low-Frequency and Rare Variants in MRPL38 for White Matter Hyperintensities on Brain Magnetic Resonance Imaging

    Jian, X., Satizabal, C. L., Smith, A. V., Wittfeld, K., Bis, J. C., Hsu, F-C., Nho, K., Li, S., Niessen, W. J. & More Authors, 2018, In : Stroke. 49, 8, p. 1812-1819

    Research output: Contribution to journalArticleScientificpeer-review

  51. GENETIC VARIATION UNDERLYING COGNITION AND ITS RELATION WITH NEUROLOGICAL OUTCOMES

    Kool, M. J., Cremers, L. G. M., Heshmatollah, A., Ikram, M. K., Uiterlinden, A. G., van Duijn, C. M., Niessen, W., Vernooij, M. W., Arfan Ikram, M. & Adams, H. H. H., 2018, In : Alzheimer's and Dementia: Translational Research and Clinical Interventions. 14, 7, p. P1652-P1653

    Research output: Contribution to journalArticleScientificpeer-review

  52. Genetic Determinants of Cortical Structure (Thickness, Surface Area and Volumes) among Disease Free Adults in the CHARGE Consortium

    Niessen, W., 2018, (In preparation) In : bioRxiv.

    Research output: Contribution to journalArticleScientific

  53. Groupwise image registration based on a total correlation dissimilarity measure for quantitative MRI and dynamic imaging data

    Guyader, J. M., Huizinga, W., Poot, D. H. J., van Kranenburg, M., Uitterdijk, A., Niessen, W. J. & Klein, S., 2018, In : Scientific Reports. 8, 1, 14 p., 13112.

    Research output: Contribution to journalArticleScientificpeer-review

  54. Intrasubject multimodal groupwise registration with the conditional template entropy

    Polfliet, M., Klein, S., Huizinga, W., Paulides, M. M., Niessen, W. J. & Vandemeulebroucke, J., 2018, In : Medical Image Analysis. 46, p. 15-25 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  55. Quantification of nonrigid liver deformation in radiofrequency ablation interventions using image registration

    Luu, H. M., Moelker, A., Klein, S., Niessen, W. & Van Walsum, T., 2018, In : Physics in Medicine and Biology. 63, 17, 12 p., 175005.

    Research output: Contribution to journalArticleScientificpeer-review

  56. Reproducible white matter tract segmentation using 3D U-net on a large-scale DTI dataset

    Li, B., de Groot, M., Vernooij, M. W., Ikram, M. A., Niessen, W. J. & Bron, E. E., 2018, Machine Learning in Medical Imaging - 9th International Workshop, MLMI 2018, Held in Conjunction with MICCAI 2018, Proceedings. Shi, Y., Suk, H-I. & Liu, M. (eds.). Springer Verlag, Vol. 11046 LNCS. p. 205-213 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11046 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  57. Thinner retinal layers are associated with changes in the visual pathway: A population-based study

    Mutlu, U., Ikram, M. K., Roshchupkin, G. V., Bonnemaijer, P. W. M., Colijn, J. M., Vingerling, J. R., Niessen, W. J., Ikram, M. A., Klaver, C. C. W. & Vernooij, M. W., 2018, In : Human Brain Mapping. 39, 11, p. 4290-4301 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  58. Towards robust CT-ultrasound registration using deep learning methods

    Sun, Y., Moelker, A., Niessen, W. J. & van Walsum, T., 2018, Understanding and Interpreting Machine Learning in Medical Image Computing Applications - First International Workshops MLCN 2018, DLF 2018, and iMIMIC 2018, Held in Conjunction with MICCAI 2018, Proceedings. Springer Verlag, Vol. 11038 LNCS. p. 43-51 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11038 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  59. 2017
  60. Retinal neurodegeneration and brain MRI markers: The Rotterdam Study

    Mutlu, U., Bonnemaijer, P. W. M., Ikram, M. A., Colijn, J. M., Cremers, L. G. M., Buitendijk, G. H. S., Vingerling, J. R., Niessen, W. J., Vernooij, M. W., Klaver, C. C. W. & Ikram, M. K., 1 Dec 2017, In : Neurobiology of Aging: age-related phenomena, neurodegeneration and neuropathology. 60, p. 183-191 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  61. Genetic susceptibility to multiple sclerosis: Brain structure and cognitive function in the general population

    Ikram, M. A., Vernooij, M. W., Roshchupkin, G. V., Hofman, A., van Duijn, C. M., Uitterlinden, A. G., Niessen, W. J., Hintzen, R. Q. & Adams, H. H., 1 Nov 2017, In : Multiple Sclerosis. 23, 13, p. 1697-1706 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  62. The effect of hippocampal function, volume and connectivity on posterior cingulate cortex functioning during episodic memory fMRI in mild cognitive impairment

    Papma, J. M., Smits, M., De Groot, M., Mattace-Raso, F. U. S., van der Lugt, A., Vrooman, H. A., Niessen, W. J., Koudstaal, P. J., van Swieten, J. C., van der Veen, F. M. & Prins, N. D., 1 Sep 2017, In : European Radiology. 27, 9, p. 3716-3724 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  63. CSF contamination-invariant statistics in conventional diffusion-weighted MRI of the fornix

    Arkesteijn, J., Poot, D., de Groot, M., Ikram, M. A., Niessen, W., van Vliet, L., Vernooij, MW. & Vos, F., 30 Aug 2017, In : Biomedical Physics & Engineering Express. 3, p. 1-14 065003.

    Research output: Contribution to journalArticleScientificpeer-review

  64. Randomly perturbed b-splines for nonrigid image registration

    Niessen, W. J., Sun, W. & Klein, S., 1 Jul 2017, In : IEEE Transactions on Pattern Analysis and Machine Intelligence. 39, 7, p. 1401-1413 13 p., 7533440.

    Research output: Contribution to journalArticleScientificpeer-review

  65. Heritability of connectivity and disconnectivity of the brain in a population-based study

    Langen, C. D., Roshchupkin, G., Adams, H. H., De Groot, M., Vos, F., Vernooij, M. W., Ikram, M. A. & Niessen, W. J., 15 Jun 2017, Proceedings of IEEE 14th International Symposium on Biomedical Imaging, ISBI 2017. IEEE Computer Society, p. 349-353 5 p. 7950535

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  66. Longitudinal analysis of diffusion-weighted MRI with a ball-and-sticks model

    Arkesteijn, G. A. M., Poot, D. H. J., Niestijl, M., Vernooij, M. W., Niessen, W. J., Van Vliet, L. J. & Vos, F. M., 15 Jun 2017, 2017 IEEE 14th International Symposium on Biomedical Imaging, ISBI 2017. IEEE Computer Society, p. 783-786 4 p. 7950635

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  67. Cortical abnormalities in adults and adolescents with major depression based on brain scans from 20 cohorts worldwide in the ENIGMA Major Depressive Disorder Working Group

    Schmaal, L., Hibar, D. P., Sämann, P. G., Hall, G. B., Baune, B. T., Jahanshad, N., Cheung, J. W., Van Erp, T. G. M., Bos, D., Ikram, M. A., Vernooij, M. W., Niessen, W. J., Tiemeier, H., Hofman, A., Wittfeld, K., Grabe, H. J., Janowitz, D., Bülow, R., Selonke, M., Völzke, H. & 61 othersGrotegerd, D., Dannlowski, U., Arolt, V., Opel, N., Heindel, W., Kugel, H., Hoehn, D., Czisch, M., Couvy-Duchesne, B., Rentería, M. E., Strike, L. T., Wright, M. J., Mills, N. T., De Zubicaray, G. I., McMahon, K. L., Medland, S. E., Martin, N. G., Gillespie, N. A., Goya-Maldonado, R., Gruber, O., Krämer, B., Hatton, S. N., Lagopoulos, J., Hickie, I. B., Frodl, T., Carballedo, A., Frey, E. M., Van Velzen, L. S., Penninx, B. W. J. H., Van Tol, M. J., Van Der Wee, N. J., Davey, C. G., Harrison, B. J., Mwangi, B., Cao, B., Soares, J. C., Veer, I. M., Walter, H., Schoepf, D., Zurowski, B., Konrad, C., Schramm, E., Normann, C., Schnell, K., Sacchet, M. D., Gotlib, I. H., MacQueen, G. M., Godlewska, B. R., Nickson, T., McIntosh, A. M., Papmeyer, M., Whalley, H. C., Hall, J., Sussmann, J. E., Li, M., Walter, MT., Aftanas, L., Brack, I., Bokhan, N. A., Thompson, P. M. & Veltman, D. J., 1 Jun 2017, In : Molecular Psychiatry. 22, 6, p. 900-909 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  68. Gray matter heritability in family-based and population-based studies using voxel-based morphometry

    van der Lee, S. J., Roshchupkin, G. V., Adams, H. H., Schmidt, H., Hofer, E., Saba, Y., Schmidt, R., Hofman, A., Amin, N., van Duijn, C. M., Vernooij, M. W., Ikram, M. A. & Niessen, W. J., 1 May 2017, In : Human Brain Mapping. 38, 5, p. 2408-2423 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  69. Automatic segmentation and quantification of the cardiac structures from non-contrast-enhanced cardiac CT scans

    Shahzad, R., Bos, D., Budde, R. P. J., Pellikaan, K., Niessen, W. J., Van Der Lugt, A. & Van Walsum, T., 11 Apr 2017, In : Physics in Medicine and Biology. 62, 9, p. 3798-3813 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  70. A comparative study of software programmes for cross-sectional skeletal muscle and adipose tissue measurements on abdominal computed tomography scans of rectal cancer patients

    van Vugt, J. L. A., Levolger, S., Gharbharan, A., Koek, M., Niessen, W. J., Burger, J. W. A., Willemsen, S. P., de Bruin, R. W. F. & IJzermans, J. N. M., 1 Apr 2017, In : Journal of Cachexia, Sarcopenia and Muscle. 8, 2, p. 285-297 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  71. Exome-sequencing in a large population-based study reveals a rare Asn396Ser variant in the LIPG gene associated with depressive symptoms

    Amin, N., Jovanova, O., Adams, H., Dehghan, A., Kavousi, M., Vernooij, M. W., Peeters, R. P., De Vrij, F. M. S., Van Der Lee, S. J., Van Rooij, J. G. J., Van Leeuwen, E. M., Chaker, L., Demirkan, A., Hofman, A., Brouwer, R. W. W., Kraaij, R., Willems Van DIjk, K., Hankemeier, T., Van Ijcken, W. F. J., Uitterlinden, A. G. & 6 othersNiessen, W. J., Franco, O. H., Kushner, S. A., Ikram, M. A., Tiemeier, H. & Van Duijn, C. M., 1 Apr 2017, In : Molecular Psychiatry. 22, 4, p. 537-543 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  72. N-terminal pro-B-type natriuretic peptide and subclinical brain damage in the general population

    Zonneveld, H. I., Ikram, M. A., Hofman, A., Niessen, W. J., Van Der Lugt, A., Krestin, G. P., Franco, O. H. & Vernooij, M. W., 1 Apr 2017, In : Radiology. 283, 1, p. 205-214 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  73. Classification of hemodynamically significant stenoses from dynamic CT perfusion and CTA myocardial territories

    Giordano, M., Poot, D., Coenen, A., van Walsum, T., Tezza, M., Nieman, K. & Niessen, W., 22 Mar 2017, In : Medical Physics. 44, 4, p. 1347-1358 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  74. A Hidden Markov Model for 3D Catheter Tip Tracking with 2D X-ray Catheterization Sequence and 3D Rotational Angiography

    Ambrosini, P., Smal, I., Ruijters, D., Niessen, W. J., Moelker, A. & Van Walsum, T., 1 Mar 2017, In : IEEE Transactions on Medical Imaging. 36, 3, p. 757-768 12 p., 7736994.

    Research output: Contribution to journalArticleScientificpeer-review

  75. Change in carotid intraplaque hemorrhage in communitydwelling subjects: A follow-up study using serial MR imaging

    Van Den Bouwhuijsen, Q. J. A., Selwaness, M., Tang, H., Niessen, W. J., Hofman, A., Franco, O. H., Van Der Lugt, A. & Vernooij, M. W., 1 Mar 2017, In : Radiology. 282, 2, p. 526-533 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  76. White matter lesions relate to tract-specific reductions in functional connectivity

    Langen, C. D., Zonneveld, H. I., White, T., Huizinga, W., Cremers, L. G. M., De Groot, M., Ikram, M. A., Niessen, W. J. & Vernooij, M. W., 1 Mar 2017, In : Neurobiology of Aging: age-related phenomena, neurodegeneration and neuropathology. 51, p. 97-103 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  77. Brain MRI-markers Associate Differentially with Cognitive Versus Functional Decline Leading to Dementia

    Verlinden, V. J. A., van der Geest, J. N., Hofman, A., Niessen, W. J., van der Lugt, A., Vernooij, M. W. & Ikram, M. A., Feb 2017, In : American Geriatrics Society. Journal. 65, 6, p. 1258–1266 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  78. Automated Registration of Freehand B-Mode Ultrasound and Magnetic Resonance Imaging of the Carotid Arteries Based on Geometric Features

    Carvalho, D. D. B., Arias Lorza, A. M., Niessen, W. J., de Bruijne, M. & Klein, S., 1 Jan 2017, In : Ultrasound in Medicine & Biology. 43, 1, p. 273-285 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  79. A discriminative event based model for Alzheimer’s disease progression modeling

    Venkatraghavan, V., Bron, E. E., Niessen, W. J. & Klein, S., 2017, Proceedings of 25th International Conference, IPMI 2017. Springer, Vol. 10265 LNCS. p. 121-133 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10265 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  80. Automatic online layer separation for vessel enhancement in X-ray angiograms for percutaneous coronary interventions

    Ma, H., Hoogendoorn, A., Regar, E., Niessen, W. J. & van Walsum, T., 2017, In : Medical Image Analysis. 39, p. 145-161

    Research output: Contribution to journalArticleScientificpeer-review

  81. Automatic quantification of brain mri to improve the diagnostic workup of dementia in memory clinic patients

    Steketee, R. M. E., Vernooij, M. W., Jasperse, B., Koek, M., Vrooman, H. A., Ikram, M. A., Papma, J. M., van Swieten, J. C., Van Der Lugt, A., Niessen, W. & Smits, M., 2017, In : Alzheimer's & Dementia. 13, 7 supplement, p. 1119-1120 2 p.

    Research output: Contribution to journalArticleScientificpeer-review

  82. Contour segmentation of the intima, media, and adventitia layers in intracoronary OCT images: application to fully automatic detection of healthy wall regions

    Zahnd, G., Hoogendoorn, A., Combaret, N., Karanasos, A., Péry, E., Sarry, L., Motreff, P., Niessen, W., Regar, E., van Soest, G., Gijsen, F. & van Walsum, T., 2017, In : International Journal of Computer Assisted Radiology and Surgery. 12, 11, p. 1923-1936

    Research output: Contribution to journalArticleScientificpeer-review

  83. Design of the ExCersion-VCI study: The effect of aerobic exercise on cerebral perfusion in patients with vascular cognitive impairment

    Leeuwis, A. E., Hooghiemstra, A. M., Amier, R., Ferro, D. A., Franken, L., Nijveldt, R., Kuijer, J. P. A., Bronzwaer, A. S. G. T., van Lieshout, J. J., Rietberg, M. B., Veerbeek, J. M., Huijsmans, R. J., Backx, F. J. G., Teunissen, C. E., Bron, E. E., Barkhof, F., Prins, N. D., Shahzad, R., Niessen, W. J., de Roos, A. & 4 othersvan Osch, M. J. P., van Rossum, A. C., Biessels, G. J. & van der Flier, W. M., 2017, In : Alzheimer's and Dementia: Translational Research and Clinical Interventions. 3, 2, p. 157-165

    Research output: Contribution to journalArticleScientificpeer-review

  84. Fully automatic and real-time catheter segmentation in X-ray fluoroscopy

    Ambrosini, P., Ruijters, D., Niessen, W. J., Moelker, A. & van Walsum, T., 2017, Medical Image Computing and Computer Assisted Intervention − MICCAI 2017 - 20th International Conference, Proceedings. Springer Verlag, Vol. 10434 LNCS. p. 577-585 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10434 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  85. Gp-Unet: Lesion detection from weak labels with a 3D regression network

    Dubost, F., Bortsova, G., Adams, H. H., Ikram, M. A., Niessen, W. J., Vernooij, M. W. & de Bruijne, M., 2017, Medical Image Computing and Computer Assisted Intervention − MICCAI 2017 - 20th International Conference, Proceedings. Descoteaux, M. (ed.). Springer Verlag, Vol. 10435 LNCS. p. 214-221 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10435 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  86. Laplacian eigenmaps for multimodal groupwise image registration

    Polfliet, M., Klein, S., Niessen, W. J. & Vandemeulebroucke, J., 2017, Medical Imaging 2017: Image Processing. Styner, M. A. & Angelini, E. D. (eds.). Bellingham, WA, USA: SPIE, 7 p. 101331N. (Proceedings of SPIE; vol. 10133).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  87. Multisite Metaanalysis of Image-Wide Genome-Wide Associations With Morphometry

    Jahanshad, N., Roshchupkin, G., Faskowitz, J., Hibar, D. P., Gutman, B. A., Adams, H. H. H., Niessen, W. J., Vernooij, M. W., Ikram, M. A. & Zwiers, M. P., 2017, Imaging Genetics. Jahanshad, N. (ed.). Elsevier Inc., p. 1-23

    Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

  88. Plasma Amyloid-beta Levels, Cerebral Small Vessel Disease, and Cognition: The Rotterdam Study

    Hilal, S., Akoudad, S., van Duijn, C. M., Niessen, W. J., Verbeek, M. M., Vanderstichele, H., Stoops, E., Ikram, M. A. & Vernooij, M. W., 2017, In : Journal of Alzheimer's Disease. 60, 3, p. 977-987

    Research output: Contribution to journalArticleScientificpeer-review

  89. Stochastic optimization with randomized smoothing for image registration

    Sun, W., Poot, D. H. J., Smal, I., Yang, X., Niessen, W. J. & Klein, S., 2017, In : Medical Image Analysis. 35, p. 146-158 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  90. The Missing Link in the Pathophysiology of Vascular Cognitive Impairment: Design of the Heart-Brain Study

    Hooghiemstra, A. M., Bertens, A. S., Leeuwis, A. E., Bron, E. E., Bots, M. L., Brunner-La Rocca, H. P., De Craen, A. J. M., van der Geest, R. J., Greving, J. P., Kappelle, L. J., Niessen, W. J., van Oostenbrugge, R. J., van Osch, M. J. P., de Roos, A., van Rossum, A. C., Biessels, G. J., van Buchem, M. A., Daemen, M. J. A. P. & van der Flier, W. M., 2017, In : Cerebrovascular Diseases Extra. 7, 3, p. 140-152

    Research output: Contribution to journalArticleScientificpeer-review

  91. The effect of non-contrast CT slice thickness on thrombus density and perviousness assessment

    Tolhuisen, M. L., Enthoven, J., Santos, E. M. M., Niessen, W. J., Beenen, L. F. M., Dippel, D. W. J., van der Lugt, A., van Zwam, W. H., Roos, Y. B. W. E. M., van Oostenbrugge, R. J. & More Authors, 2017, Molecular Imaging, Reconstruction and Analysis of Moving Body Organs, and Stroke Imaging and Treatment - 5th International Workshop, CMMI 2017 2nd International Workshop, RAMBO 2017 and 1st International Workshop, SWITCH 2017 Held in Conjunction with MICCAI 2017, Proceedings. Cardoso, J., Arbel, T. & Gao, F. (eds.). Springer Verlag, Vol. 10555 LNCS. p. 168-175 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10555 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  92. The structural disconnectome: A pathology-sensitive extension of the structural connectome

    Langen, C. D., Vernooij, M. W., Cremers, L. G. M., Huizinga, W., De Groot, M., Ikram, M. A., White, T. & Niessen, W. J., 2017, 2017 IEEE 14th International Symposium on Biomedical Imaging, ISBI 2017. IEEE Computer Society, p. 366-370 7950539

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  93. Using GOMS and NASA-TLX to Evaluate Human-Computer Interaction Process in Interactive Segmentation

    Ramkumar, A., Stappers, P. J., Niessen, W., Adebahr, S., Schimek-Jasch, T., Nestle, U. & Song, Y., 2017, In : International Journal of Human-Computer Interaction. 33, 2, p. 123-134 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  94. 2016
  95. Total Correlation-Based Groupwise Image Registration for Quantitative MRI

    Guyader, J. M., Huizinga, W., Fortunati, V., Poot, D. H., Kranenburg, M. V., Veenland, J. F., Paulides, M. M., Niessen, W. J. & Klein, S., 16 Dec 2016, Proceedings - 29th IEEE Conference on Computer Vision and Pattern Recognition Workshops, CVPRW 2016. IEEE Computer Society, p. 626-633 8 p. 7789574

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  96. Heritability of the shape of subcortical brain structures in the general population

    Roshchupkin, G. V., Gutman, B. A., Vernooij, M. W., Jahanshad, N., Martin, N. G., Hofman, A., McMahon, K. L., Van Der Lee, S. J., van Duijn, C. M., De Zubicaray, G. I., Uitterlinden, A. G., Wright, M. J., Niessen, W. J., Thompson, P. M., Ikram, M. A. & Adams, H. H., 15 Dec 2016, In : Nature Communications. 7, 13738.

    Research output: Contribution to journalArticleScientificpeer-review

  97. Determinants of carotid atherosclerotic plaque burden in a stroke-free population

    Selwaness, M., Hameeteman, R., Van 't Klooster, R., Van den Bouwhuijsen, Q., Hofman, A., Franco, O. H., Niessen, W. J., Klein, S., Vernooij, M. W., Van der Lugt, A. & Wentzel, J. J., 1 Dec 2016, In : Atherosclerosis. 255, p. 186-192 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  98. Fine-mapping the effects of Alzheimer's disease risk loci on brain morphology

    Roshchupkin, G. V., Adams, H. H., van der Lee, S. J., Vernooij, M. W., van Duijn, C. M., Uitterlinden, A. G., van der Lugt, A., Hofman, A., Niessen, W. J. & Ikram, M. A., 1 Dec 2016, In : Neurobiology of Aging: age-related phenomena, neurodegeneration and neuropathology. 48, p. 204-211 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  99. Novel genetic loci underlying human intracranial volume identified through genome-wide association

    Adams, H. H. H., Hibar, D. P., Chouraki, V., Stein, J. L., Nyquist, P. A., Rentería, M. E., Trompet, S., Arias-Vasquez, A., Seshadri, S., Desrivières, S., Beecham, A. H., Jahanshad, N., Wittfeld, K., Van Der Lee, S. J., Abramovic, L., Alhusaini, S., Amin, N., Andersson, M., Arfanakis, K., Aribisala, B. S. & 322 othersArmstrong, N. J., Athanasiu, L., Axelsson, T., Beiser, A., Bernard, M., Bis, J. C., Blanken, L. M. E., Blanton, S. H., Bohlken, M. M., Boks, M. P., Bralten, J., Brickman, A. M., Carmichael, O., Chakravarty, M. M., Chauhan, G., Chen, Q., Ching, C. R. K., Cuellar-Partida, G., Braber, A. D., Doan, N. T., Ehrlich, S., Filippi, I., Ge, T., Giddaluru, S., Goldman, A. L., Gottesman, R. F., Greven, C. U., Grimm, O., Griswold, M. E., Guadalupe, T., Hass, J., Haukvik, U. K., Hilal, S., Hofer, E., Hoehn, D., Holmes, A. J., Hoogman, M., Janowitz, D., Jia, T., Kasperaviciute, D., Kim, S., Klein, M., Kraemer, B., Lee, P. H., Liao, J., Liewald, D. C. M., Lopez, L. M., Luciano, M., Macare, C., Marquand, A., Matarin, M., Mather, K. A., Mattheisen, M., Mazoyer, B., McKay, D. R., McWhirter, R., Milaneschi, Y., Mirza-Schreiber, N., Muetzel, R. L., Maniega, S. M., Nho, K., Nugent, A. C., Loohuis, L. M. O., Oosterlaan, J., Papmeyer, M., Pappa, I., Pirpamer, L., Pudas, S., Pütz, B., Rajan, K. B., Ramasamy, A., Richards, J. S., Risacher, S. L., Roiz-Santiañez, R., Rommelse, N., Rose, E. J., Royle, N. A., Rundek, T., Sämann, P. G., Satizabal, C. L., Schmaal, L., Schork, A. J., Shen, L., Shin, J., Shumskaya, E., Smith, A. V., Sprooten, E., Strike, L. T., Teumer, A., Thomson, R., Tordesillas-Gutierrez, D., Toro, R., Trabzuni, D., Vaidya, D., Van Der Grond, J., Van Der Meer, D., Van Donkelaar, M. M. J., Van Eijk, K. R., Van Erp, T. G. M., Van Rooij, D., Walton, E., Westlye, L. T., Whelan, C. D., Windham, B. G., Winkler, A. M., Woldehawariat, G., Wolf, C., Wolfers, T., Xu, B., Yanek, L. R., Yang, J., Zijdenbos, A., Zwiers, M. P., Agartz, I., Aggarwal, N. T., Almasy, L., Ames, D., Amouyel, P., Andreassen, O. A., Arepalli, S., Assareh, A. A., Barral, S., Bastin, M. E., Becker, D. M., Becker, J. T., Bennett, D. A., Blangero, J., Van Bokhoven, H., Boomsma, D. I., Brodaty, H., Brouwer, R. M., Brunner, H. G., Buckner, R. L., Buitelaar, J. K., Bulayeva, K. B., Cahn, W., Calhoun, V. D., Cannon, D. M., Cavalleri, G. L., Chen, C., Cheng, C. Y., Cichon, S., Cookson, M. R., Corvin, A., Crespo-Facorro, B., Curran, J. E., Czisch, M., Dale, A. M., Davies, G. E., De Geus, E. J. C., De Jager, P. L., De Zubicaray, G. I., Delanty, N., Depondt, C., Destefano, A. L., Dillman, A., Djurovic, S., Donohoe, G., Drevets, W. C., Duggirala, R., Dyer, T. D., Erk, S., Espeseth, T., Evans, D. A., Fedko, I. O., Fernández, G., Ferrucci, L., Fisher, S. E., Fleischman, D. A., Ford, I., Foroud, T. M., Fox, P. T., Francks, C., Fukunaga, M., Gibbs, J. R., Glahn, D. C., Gollub, R. L., Göring, H. H. H., Grabe, H. J., Green, R. C., Gruber, O., Gudnason, V., Guelfi, S., Hansell, N. K., Hardy, J., Hartman, C. A., Hashimoto, R., Hegenscheid, K., Heinz, A., Le Hellard, S., Hernandez, D. G., Heslenfeld, D. J., Ho, B. C., Hoekstra, P. J., Hoffmann, W., Hofman, A., Holsboer, F., Homuth, G., Hosten, N., Hottenga, J. J., Pol, H. E. H., Ikeda, M., Ikram, M. K., Jack, C. R., Jenkinson, M., Johnson, R., Jönsson, E. G., Jukema, J. W., Kahn, R. S., Kanai, R., Kloszewska, I., Knopman, D. S., Kochunov, P., Kwok, J. B., Lawrie, S. M., Lemaître, H., Liu, X., Longo, D. L., Longstreth, W. T., Lopez, O. L., Lovestone, S., Martinez, O., Martinot, J. L., Mattay, V. S., McDonald, C., McIntosh, A. M., McMahon, K. L., McMahon, F. J., Mecocci, P., Melle, I., Meyer-Lindenberg, A., Mohnke, S., Montgomery, G. W., Morris, D. W., Mosley, T. H., Mühleisen, T. W., Müller-Myhsok, B., Nalls, M. A., Nauck, M., Nichols, T. E., Niessen, W. J., Nöthen, M. M., Nyberg, L., Ohi, K., Olvera, R. L., Ophoff, R. A., Pandolfo, M., Paus, T., Pausova, Z., Penninx, B. W. J. H., Pike, G. B., Potkin, S. G., Psaty, B. M., Reppermund, S., Rietschel, M., Roffman, J. L., Romanczuk-Seiferth, N., Rotter, J. I., Ryten, M., Sacco, R. L., Sachdev, P. S., Saykin, A. J., Schmidt, R., Schofield, P. R., Sigurdsson, S., Simmons, A., Singleton, A., Sisodiya, S. M., Smith, C., Smoller, J. W., Soininen, H., Srikanth, V., Steen, V. M., Stott, D. J., Sussmann, J. E., Thalamuthu, A., Tiemeier, H., Toga, A. W., Traynor, B. J., Troncoso, J., Turner, J. A., Tzourio, C., Uitterlinden, A. G., Hernández, M. C. V., Van Der Brug, M., Van Der Lugt, A., Van Der Wee, N. J. A., Van Duijn, C. M., Van Haren, N. E. M., Van't Ent, D., Van Tol, M. J., Vardarajan, B. N., Veltman, D. J., Vernooij, M. W., Völzke, H., Walter, H., Wardlaw, J. M., Wassink, T. H., Weale, M. E., Weinberger, D. R., Weiner, M. W., Wen, W., Westman, E., White, T., Wong, T. Y., Wright, C. B., Zielke, H. R., Zonderman, A. B., Deary, I. J., Decarli, C., Schmidt, H., Martin, N. G., De Craen, A. J. M., Wright, M. J., Launer, L. J., Schumann, G., Fornage, M., Franke, B., Debette, S., Medland, S. E., Ikram, M. A. & Thompson, P. M., 1 Dec 2016, In : Nature Neuroscience. 19, 12, p. 1569-1582 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  100. Multiparametric computer-aided differential diagnosis of Alzheimer’s disease and frontotemporal dementia using structural and advanced MRI

    Bron, E. E., Smits, M., Papma, J. M., Steketee, R. M. E., Meijboom, R., De Groot, M., van Swieten, J. C., Niessen, W. J. & Klein, S., Dec 2016, In : European Radiology. 27, 8, p. 1-11 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  101. White matter microstructure improves stroke risk prediction in the general population

    Evans, T. E., O'Sullivan, M. J., De Groot, M., Niessen, W. J., Hofman, A., Krestin, G. P., Van Der Lugt, A., Portegies, M. L. P., Koudstaal, P. J., Bos, D., Vernooij, M. W. & Ikram, M. A., 1 Nov 2016, In : Stroke. 47, 11, p. 2756-2762 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  102. HASE: Framework for efficient high-dimensional association analyses

    Roshchupkin, G. V., Adams, H. H. H., Vernooij, M. W., Hofman, A., Van Duijn, C. M., Ikram, M. A. & Niessen, W. J., 26 Oct 2016, In : Scientific Reports. 6, 36076.

    Research output: Contribution to journalArticleScientificpeer-review

  103. Markers of cerebral small vessel disease and severity of depression in the general population

    Direk, N., Perez, H. S., Akoudad, S., Verhaaren, B. F. J., Niessen, W. J., Hofman, A., Vernooij, M. W., Ikram, M. A. & Tiemeier, H., 30 Jul 2016, In : Psychiatry Research - Neuroimaging. 253, p. 1-6 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  104. Tract-specific white matter microstructure and gait in humans

    Verlinden, V. J. A., De Groot, M., Cremers, L. G. M., van der Geest, J. N., Hofman, A., Niessen, W. J., Van Der Lugt, A., Vernooij, M. W. & Ikram, M. A., 1 Jul 2016, In : Neurobiology of Aging: age-related phenomena, neurodegeneration and neuropathology. 43, p. 164-173 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  105. An automatic 3D facial landmarking algorithm using 2D gabor wavelets

    De Jong, M. A., Wollstein, A., Ruff, C., Dunaway, D., Hysi, P., Spector, T., Liu, F., Niessen, W., Koudstaal, M. J., Kayser, M., Wolvius, E. B. & Böhringer, S., 1 Feb 2016, In : IEEE Transactions on Image Processing. 25, 2, p. 580-588 9 p., 7312454.

    Research output: Contribution to journalArticleScientificpeer-review

  106. 4D Ultrasound Tracking of Liver and its Verification for TIPS Guidance

    Banerjee, J., Klink, C., Niessen, W. J., Moelker, A. & Van Walsum, T., 2016, In : IEEE Transactions on Medical Imaging. 35, 1, p. 52-62 7152937.

    Research output: Contribution to journalArticleScientificpeer-review

  107. Age-dependent effects of methylphenidate on the human dopaminergic system in young vs adult patients with attention-deficit/hyperactivity disorder: A randomized clinical trial

    Schrantee, A., Tamminga, H. G. H., Bouziane, C., Bottelier, M. A., Bron, E. E., Mutsaerts, H. J. M. M., Zwinderman, A. H., Groote, I. R., Rombouts, S. A. R. B., Niessen, W. J. & More Authors, 2016, In : JAMA Psychiatry. 73, 9, p. 955-962

    Research output: Contribution to journalArticleScientificpeer-review

  108. Altered tract-specific white matter microstructure is related to poorer cognitive performance. The Rotterdam Study

    Cremers, LGM., de Groot, M., Hofman, A., Krestin, GP., van der Lugt, A., Niessen, WJ., Vernooij, MW. & Arfan Ikram, M., 2016, In : Neurobiology of Aging: age-related phenomena, neurodegeneration and neuropathology. 39, p. 108-117

    Research output: Contribution to journalArticleScientificpeer-review

  109. An automatic registration method for pre- and post-interventional CT images for assessing treatment success in liver RFA treatment

    Luu, H. M., Niessen, W., Van Walsum, T., Klink, C. & Moelker, A., 2016, In : Medical Physics. 42, 9, p. 5559-5567

    Research output: Contribution to journalArticleScientificpeer-review

  110. Association of Coffee Consumption with MRI Markers and Cognitive Function: A Population-Based Study

    Araújo, L. F., Mirza, S. S., Bos, D., Niessen, W. J., Barreto, S. M., Van Der Lugt, A., Vernooij, M. W., Hofman, A., Tiemeier, H., Ikram, M. A. & Polidori, M. C., 2016, In : Journal of Alzheimer's Disease. 53, 2, p. 451-461 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  111. Automated entire thrombus density measurements for robust and comprehensive thrombus characterization in patients with acute ischemic stroke

    Santos, EMM., Niessen, WJ., Yoo, AJ., Berkhemer, OA., Beenen, LF., Majoie, CB. & Marquering, HA., 2016, In : PLoS ONE. 11, 1, p. e0145641-1-e0145641-16

    Research output: Contribution to journalArticleScientificpeer-review

  112. Concurrent white and gray matter degeneration of disease-specific networks in early-stage Alzheimer's disease and behavioral variant frontotemporal dementia

    Steketee, R. M. E., Meijboom, R., de Groot, M., Bron, E. E., Niessen, W. J., van der Lugt, A., van Swieten, J. C. & Smits, M., 2016, In : Neurobiology of Aging: age-related phenomena, neurodegeneration and neuropathology. 43, p. 119-128

    Research output: Contribution to journalArticleScientificpeer-review

  113. Design issues of the existing radiotherapy segmentation software

    Ramkumar, A., Song, Y., Niessen, W. & Stappers, P. J., 2016, In : International Symposium of Human Factors and Ergonomics in Healthcare. Proceedings. 5, 1, p. 1-8 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  114. Fusion of fibrous cap thickness and wall shear stress to assess plaque vulnerability in coronary arteries: a pilot study

    Zahnd, G., Schrauwen, J., Karanasos, A., Regar, E., Niessen, W., van Walsum, T. & Gijsen, F., 2016, In : International Journal of Computer Assisted Radiology and Surgery. 11, 10, p. 1779-1790

    Research output: Contribution to journalArticleScientificpeer-review

  115. Lower microstructural integrity of brain white matter is related to higher mortality

    Sedaghat, S., Cremers, L. G. M., De Groot, M., Hofman, A., Van Der Lugt, A., Niessen, W. J., Franco, O. H., Dehghan, A., Ikram, M. A. & Vernooij, M. W., 2016, In : Neurology. 87, 9, p. 927-934 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  116. MR brain image analysis in dementia: From quantitative imaging biomarkers to ageing brain models and imaging genetics

    Niessen, W. J., 2016, In : Medical Image Analysis. 33, p. 107-113

    Research output: Contribution to journalEditorialScientificpeer-review

  117. Modeling the brain morphology distribution in the general aging population

    Huizinga, W., Poot, D. H. J., Roshchupkin, G., Bron, E. E., Ikram, M. A., Vernooij, M. W., Rueckert, D., Niessen, W. J. & Klein, S., 2016, Medical Imaging 2016: Biomedical Applications in Molecular, Structural, and Functional Imaging. Gimi, B. & Krol, A. (eds.). SPIE, Vol. 9788. p. 1-7 97880I. (Proceedings of SPIE; vol. 9788).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  118. Non-rigid registration of liver ct images for ct-guided ablation of liver tumors

    Luu, H. M., Klink, C., Niessen, W., Moelker, A. & Van Walsum, T., 2016, In : PLoS ONE. 11, 9, e0161600.

    Research output: Contribution to journalArticleScientificpeer-review

  119. Observer variability of absolute and relative thrombus density measurements in patients with acute ischemic stroke

    Santos, EMM., Yoo, AJ., Beenen, LF., Berkhemer, OA., den Blanken, MD., Wismans, C., Niessen, WJ., Majoie, CB. & Marquering, HA., 2016, In : Neuroradiology: a journal devoted to neuroimaging and interventional neuroradiology. 58, 2, p. 133-139 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  120. PCA-based groupwise image registration for quantitative MRI

    Huizinga, W., Poot, DHJ., Guyader, JM., Klaassen, R., Coolen, BF., van Kranenburg, M., van Geuns, RJM., Uitterdijk, A., Polfliet, M., Vandermeulebroucke, J., Leemans, A., Niessen, WJ. & Klein, S., 2016, In : Medical Image Analysis. 29, p. 65-78 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  121. Permeable Thrombi Are Associated with Higher Intravenous Recombinant Tissue-Type Plasminogen Activator Treatment Success in Patients with Acute Ischemic Stroke

    Santos, E. M. M., Dankbaar, J. W., Treurniet, K. M., Horsch, A. D., Roos, Y. B., Kappelle, L. J., Niessen, W. J., Majoie, C. B., Velthuis, B. & Marquering, H. A., 2016, In : Stroke. 47, 8, p. 2058-2065

    Research output: Contribution to journalArticleScientificpeer-review

  122. Response to Dr Fried & Dr Kievit, and Dr Malhi et al.

    Schmaal, L., Veltman, D. J., Van Erp, T. G. M., Smann, P. G., Frodl, T., Jahanshad, N., Loehrer, E., Vernooij, M. W., Niessen, W. J., Ikram, M. A. & More Authors, 2016, In : Molecular Psychiatry. 21, 6, p. 726-728

    Research output: Contribution to journalComment/Letter to the editorScientificpeer-review

  123. Retinal microvasculature and white matter microstructure

    Mutlu, U., Cremers, L. G. M., De Groot, M., Hofman, A., Niessen, W. J., Van Der Lugt, A., Klaver, C. C. W., Ikram, M. A., Vernooij, M. W. & Ikram, M. K., 2016, In : Neurology. 87, 10, p. 1003-1010 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  124. Thrombus Permeability Is Associated with Improved Functional Outcome and Recanalization in Patients with Ischemic Stroke

    Santos, E. M. M., Marquering, H. A., Den Blanken, M. D., Berkhemer, O. A., Boers, A. M. M., Yoo, A. J., Beenen, L. F., Treurniet, K. M., Wismans, C., Niessen, W. J. & More Authors, 2016, In : Stroke. 47, 3, p. 732-741

    Research output: Contribution to journalArticleScientificpeer-review

  125. User Interaction in Semi-Automatic Segmentation of Organs at Risk: A Case Study in Radiotherapy

    Ramkumar, A., Dolz, J., Kirisli, HA., Adebahr, S., Schimek-Jasch, T., Nestle, U., Massoptier, L., Varga, E., Stappers, PJ., Niessen, WJ. & Song, Y., 2016, In : Journal of Digital Imaging. 29, 2, p. 264-277 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  126. 2015
  127. Multiple sparse representations classification

    Plenge, E., Klein, S. S., Niessen, W. J. & Meijering, E., 15 Jul 2015, In : PLoS ONE. 10, 7, 23 p., e0131968.

    Research output: Contribution to journalArticleScientificpeer-review

  128. 3D catheter tip tracking in 2D x-ray image sequences using a hidden Markov model and 3D rotational angiography

    Ambrosini, P., Smal, I., Ruijters, D., Niessen, WJ., Moelker, A. & van Walsum, T., 2015, Augmented Environments for Computer-Assisted Interventions: Proceedings 10th International Workshop, AE-CAI 2015, held in Conjunction with MICCAI 2015. Linte, CA., Yaniv, Z. & Fallavollita, P. (eds.). Cham, Switzerland: Springer, p. 38-49 12 p. (Lecture Notes in Computer Science; vol. 9365).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  129. Association of Alzheimer's disease GWAS loci with MRI markers of brain aging

    Chauhan, G., Adams, H. H. H., Bis, J. C., Weinstein, G., Yu, L., Töglhofer, A. M., Smith, A. V., van der Lee, S. J., Gottesman, R. F., Niessen, W. J. & More Authors, 2015, In : Neurobiology of Aging. 36, 4, p. 1765.e7-1765.e16

    Research output: Contribution to journalArticleScientificpeer-review

  130. Automatic tissue segmentation of head and neck MR images for hyperthermia treatment planning

    Fortunati, V., Verhaart, RF., Niessen, WJ., Veenland, JF., Paulides, MM. & van Walsum, T., 2015, In : Physics in Medicine and Biology. 60, 16, p. 6547-6562 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  131. Carotid artery wall segmentation in multispectral MRI by coupled optimal surface graph cuts

    Arias-Lorza, AM., Petersen, J., van Engelen, A., Selwaness, M., van der Lugt, A., Niessen, WJ. & de Bruijne, M., 2015, In : IEEE Transactions on Medical Imaging. PP, 99, p. 1-11 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  132. Continuous roadmapping in liver TACE procedures using 2D¿3D catheter-based registration

    Ambrosini, P., Ruijters, D., Niessen, WJ., Moelker, A. & van Walsum, T., 2015, In : International Journal of Computer Assisted Radiology and Surgery (online). 10, 9, p. 1357-1370 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  133. Epicardial fat volume is related to atherosclerotic calcification in multiple vessel beds

    Bos, D., Shahzad, R., van Walsum, T., van Vliet, LJ., Franco, OH., Hofman, A., Niessen, WJ., Vernooij, MW. & van der Lugt, A., 2015, In : European Heart Journal - Cardiovascular Imaging. 16, 11, p. 1264-1269 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  134. Erratum: An automatic registration method for pre- and post-interventional CT images for assessing treatment success in liver RFA treatment (Medical Physics (2015) 42 (5559-5567))

    Luu, H. M., Klink, C., Niessen, W., Moelker, A. & Van Walsum, T., 2015, In : Medical Physics. 42, 12, 1 p.

    Research output: Contribution to journalComment/Letter to the editorScientificpeer-review

  135. Fast en robust 3D ultrasound registration - block and game theoretic matching

    Banerjee, J., Klink, SJC., Peters, ED., Niessen, WJ., Moelker, A. & van Walsum, T., 2015, In : Medical Image Analysis. 20, 1, p. 173-183 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  136. Fastr: a work flow engine for advanced data flows

    Achterberg, HC., Koek, M. & Niessen, WJ., 2015, Proceedings of the 1st MICCAI Workshop on Management and Processing of Images for Population Imaging. Barillot, C., Dojat, M., Kennedy, D. & Niessen, WJ. (eds.). s.l.: s.n., p. 39-46 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  137. Feature selection based on the SVM weight vector for classification of dementia

    Bron, EE., Smits, M., Niessen, WJ. & Klein, S., 2015, In : IEEE Journal of Biomedical and Health Informatics. 19, 5, p. 1617-1626 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  138. Fully automated carotid plaque segmentation in combined contrast enhanced and B-mode ultrasound

    Akkus, Z., Carvalho, DDB., van den Oord, SCH., Schinkel, AFL., Niessen, WJ., de Jong, N., van der Steen, AFW., Klein, S. & Bosch, JG., 2015, In : Ultrasound in Medicine & Biology. 41, 2, p. 517-531 15 p.

    Research output: Contribution to journalArticleScientificpeer-review

  139. Groupwise image registration of multimodal head-and-neck images

    Guyader, J-M., Huizinga, W., Fortunati, V., Veenland, JF., Paulides, MM., Niessen, WJ. & Klein, S., 2015, Proceedings of the 12th IEEE International Symposium on Biomedical Imaging. Kova¿evi¿, J. & Angelini, E. (eds.). Piscataway: IEEE Society, p. 730-733 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  140. IT infrastructure to support the secondary use of routinely acquired clinical imaging data for research

    Leung, KYE., van der Lijn, F., Vrooman, HA., Sturkenboom, MCJM. & Niessen, WJ., 2015, In : NeuroInformatics. 13, 1, p. 65-81 17 p.

    Research output: Contribution to journalArticleScientificpeer-review

  141. Influence of image registration on apparent diffusion coefficient images computed from free-breathing diffusion MR images of the abdomen

    Guyader, J-M., Bernardin, L., Douglas, NHM., Poot, DHJ., Niessen, WJ. & Klein, S., 2015, In : Journal of Magnetic Resonance Imaging. 42, 2, p. 315-330 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  142. Integrated analysis and visualization of group differences in structural and functional brain connectivity: Applications in typical ageing and schizophrenia

    Langen, CD., White, T., Ikram, MA., Vernooij, MW. & Niessen, WJ., 2015, In : PLoS ONE. 10, 9, art.nr. e0137484, p. 1-25 25 p.

    Research output: Contribution to journalArticleScientificpeer-review

  143. Intracranial stenosis, cerebrovascular diseases, and cognitive impairment in Chinese

    Hilal, S., Saini, M., Tan, CS., Catindig, JA., Dong, YH., Holandez, RL., Niessen, WJ., Vrooman, HA., Ting, E., Wong, TY., Chen, C., Venketasubramaniam, N. & Ikram, MK., 2015, In : Alzheimer Disease and Associated Disorders. 29, 1, p. 12-17 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  144. Layer separation for vessel enhancement in interventional x-ray angiograms using morphological filtering and robust PCA

    Ma, H., Dibildox, G., Banerjee, J., Niessen, WJ., Schultz, C., Regar, E. & van Walsum, T., 2015, Augmented Environments for Computer-Assisted Interventions: Proceedings 10th International Workshop, AE-CAI 2015, held in Conjunction with MICCAI 2015. Linte, CA., Yaniv, Z. & Fallavollita, P. (eds.). Cham, Switzerland: Springer, p. 104-113 10 p. (Lecture Notes in Computer Science; vol. 9365).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  145. MRI integration into treatment planning of head and neck tumors: Can patient immobilization be avoided?

    Fortunati, V., Verhaart, RF., Verduijn, GM., van der Lugt, A., Angeloni, F., Niessen, WJ., Veenland, JF., Paulides, MM. & van Walsum, T., 2015, In : Radiotherapy & Oncology. 115, 2, p. 191-194 4 p.

    Research output: Contribution to journalArticleScientificpeer-review

  146. Multi-Ethnic Genome-Wide Association Study of Cerebral White Matter Hyperintensities on MRI

    Verhaaren, BFJ., Debette, S., Bis, JC., Smith, JA., Ikram, MK., Adams, HH. & Niessen, WJ., 2015, In : Circulation: Cardiovascular Genetics. 8, 2, p. 399-409 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  147. Multi-center MRI carotid plaque component segmentation using feature normalization and transfer learning

    van Engelen, A., van Dijk, AC., Truijman, MTB., Klooster, R. V. ., van Opbroek, A., van der Lugt, A., Niessen, WJ., Kooi, ME. & Bruijne, M. D., 2015, In : IEEE Transactions on Medical Imaging. 34, 6, p. 1294-1305 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  148. Population imaging study IT infrastructure: An automated continuous workflow approach

    Koek, M., Achterberg, HC., de Groot, M., Vast, E., Klein, S. & Niessen, WJ., 2015, Proceedings of the 1st MICCAI Workshop on Management and Processing of Images for Population Imaging. Barillot, C., Dojat, M., Kennedy, D. & Niessen, WJ. (eds.). s.l.: s.n., p. 31-38 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  149. Quantification of fibrous cap thickness in intracoronary optical coherence tomography with a contour segmentation method based on dynamic programming

    Zahnd, G., Karanasos, A., van Soest, G., Regar, E., Niessen, W., Gijsen, F. & van Walsum, T., 2015, In : International Journal of Computer Assisted Radiology and Surgery. 10, 9, p. 1383-1394

    Research output: Contribution to journalArticleScientificpeer-review

  150. Quantitative evaluation of noise reduction and vesselness filters for liver vessel segmentation on abdominal CTA images

    Luu, H. M., Klink, C., Moelker, A., Niessen, W. & Van Walsum, T., 2015, In : Physics in Medicine and Biology. 60, 10, p. 3905-3926

    Research output: Contribution to journalArticleScientificpeer-review

  151. Respiratory motion estimation in x-ray angiography for improved guidance during coronary interventions

    Baka, N., Lelieveldt, BPF., Schultz, C., Niessen, WJ. & van Walsum, T., 2015, In : Physics in Medicine and Biology. 60, 9, p. 3617-3637 21 p.

    Research output: Contribution to journalArticleScientificpeer-review

  152. Retinal neurodegeneration on optical coherence tomography and cerebral atrophy

    Ong, Y-T., Hilal, S., Cheung, CY., Venketasubramanian, N., Niessen, WJ., Vrooman, H., Anuar, AR., Chew, M., Chen, C., Wong, TY. & Ikram, MK., 2015, In : Neuroscience Letters. 584, p. 12-16 5 p.

    Research output: Contribution to journalArticleScientificpeer-review

  153. Risk factors and consequences of cortical thickness in an Asian population

    Hilal, S., Xin, X., Ang, SL., Tan, CS., Venketasubramanian, N., Niessen, WJ., Vrooman, H., Wong, TY., Chen, C. & Ikram, MK., 2015, In : Medicine (Baltimore): analytical reviews of general medicine, neurology, psychiatry, dermatology and pediatrics. 94, 23, p. 1-8 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  154. Sarcopenia impairs survival in patients with potentially curable hepatocellular carcinoma

    Levolger, S., van Vledder, MG., Muslem, R., Koek, M., Niessen, WJ., de Man, RA., de Bruin, RWF. & IJzermans, JNM., 2015, In : Journal of Surgical Oncology. 112, 2, p. 208-213 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  155. Standardized evaluation of algorithms for computer-aided diagnosis of dementia based on structural MRI: The CADDementia challenge

    Niessen, WJ. & et, A., 2015, In : NeuroImage. 111, p. 562-579 18 p.

    Research output: Contribution to journalArticleScientificpeer-review

  156. Structural brain alterations in community dwelling individuals with chronic joint pain

    de Kruijf, M., Bos, D., Huygen, F. J. P. M., Niessen, WJ., Tiemeier, H., Hofman, A., Uitterlinden, AG., Vernooij, MW., Ikram, MA. & van Meurs, JB., 2015, In : American Journal of Neuroradiology. PP, 99, p. 1-9 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  157. Subclinical cardiac dysfunction increases the risk of stroke and dementia

    de Bruijn, RFAG., Portegies, MLP., Leening, MJG., Bos, MJ., Hofman, A., van der Lugt, A., Niessen, WJ., Vernooij, MW., Franco, OH., Koudstaal, PJ. & Ikram, MA., 2015, In : Neurology. 84, 8, p. 833-840 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  158. Subcortical atrophy in cognitive impairment and dementia

    Hilal, S., Amin, SM., Venketasubramanian, N., Niessen, WJ., Vrooman, H., Wong, TY., Chen, C. & Ikram, MK., 2015, In : Journal of Alzheimer's Disease. 48, 3, p. 813-823 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  159. Subcortical brain alterations in major depressive disorder: findings from the ENIGMA Major Depressive Disorder working group

    Niessen, WJ. & et, A., 2015, In : Molecular Psychiatry. PP, pp, p. 1-7 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  160. The Rotterdam Scan Study: design update 2016 and main findings

    Ikram, MA., van der Lugt, A., Niessen, WJ., Koudstaal, PJ., Krestin, GP., Hofman, A., Bos, D. & Vernooij, MW., 2015, In : European Journal of Epidemiology. 30, 12, p. 1299-1315 17 p.

    Research output: Contribution to journalArticleScientificpeer-review

  161. The bidirectional association between reduced cerebral blood flow and brain

    Zonneveld, HI., Loehrer, EA., Hofman, A., Niessen, WJ., van der Lugt, A., Krestin, GP., Ikram, MA. & Vernooij, MW., 2015, In : Journal of Cerebral Blood Flow and Metabolism. 35, 11, p. 1882-1887 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  162. The role of the posterior fossa in developing Chiari I malformation in children with craniosynostosis syndromes

    Rijken, BFM., Lequin, MH., van der Lijn, F., van Veelen-Vincent, MLC., de Rooi, J., Hoogendam, YY., Niessen, WJ. & Mathijssen, IMJ., 2015, In : Journal of Cranio-Maxillofacial Surgery. 43, 6, p. 813-819 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  163. The use of atlas registration and graph cuts for prostate segmentation in magnetic resonance images

    Korsager, A. S., Fortunati, V., Van Der Lijn, F., Carl, J., Niessen, W., Østergaard, L. R. & Van Walsum, T., 2015, In : Medical Physics. 42, 4, p. 1614-1624

    Research output: Contribution to journalArticleScientificpeer-review

  164. Tract-specific white matter degeneration in aging: The Rotterdam Study

    de Groot, M., Ikram, MA., Akoudad, S., Krestin, GP., Hofman, A., van der Lugt, A., Niessen, WJ. & Vernooij, M. W., 2015, In : Alzheimer's & Dementia. 11, 3, p. 321-330 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  165. Validation of Renal Artery Dimensions Measured by Magnetic Resonance Angiography in Patients Referred for Renal Sympathetic Denervation

    van Kranenburg, M., Karanasos, A., Chelu, R. G., van der Heide, E., Ouhlous, M., Nieman, K., van Mieghem, N., Krestin, G., Niessen, W., Zijlstra, F., van Geuns, R. J. & Daemen, J., 2015, In : Academic Radiology. 22, 9, p. 1106-1114

    Research output: Contribution to journalArticleScientificpeer-review

  166. White matter degeneration with aging: Longitudinal diffusion MR imaging analysis

    de Groot, M., Cremers, LGM., Arfan Ikram, M., Hofman, A., Krestin, GP., van der Lugt, A., Niessen, WJ. & Vernooij, MW., 2015, In : Radiology. PP, 99, p. 1-10 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  167. White matter lesion progression: Genome-wide search for genetic influences

    Hofer, E., Cavalieri, M., Bis, JC., DeCarli, C., Fornage, M., Sigurdsson, S., Srikanth, V., Trompet, S., Verhaaren, BFJ., Wolf, C. & Niessen, WJ., 2015, In : Stroke. 46, 11, p. 3048-3057 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  168. XNAT imaging platform for BioMedBridges and CTMM TraIT

    Klein, S., Vast, E., van Soest, J., Dekker, A., Koek, M. & Niessen, WJ., 2015, In : Journal of Clinical Bioinformatics. 5, Suppl 1, p. 1-18 18 p.

    Research output: Contribution to journalArticleScientificpeer-review

  169. 2014
  170. 2D/3D catheter-based registration for image guidance in TACE of liver tumors

    Ambrosini, P., Ruijters, D., Moelker, A., Niessen, WJ. & van Walsum, T., 2014, In : Lecture Notes in Computer Science. 8498, p. 246-255 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  171. 3D/3D registration of coronary CTA and biplane XA reconstructions for improved image guidance

    Dibildox, G., Baka, N., Punt, M., Aben, JP., Schultz, C., Niessen, WJ. & van Walsum, T., 2014, In : Medical Physics. 41, p. 091909-091909 1 p.

    Research output: Contribution to journalArticleScientificpeer-review

  172. Additional diagnostic value of integrated analysis of cardiac CTA and SPECT MPI using the SMARTVis system in patients with suspected coronary artery disease

    Krisli, HA., Gupta, V., Shahzad, R., Al Younis, I., Dharampal, A., Van Geuns, R-J., Scholte, AJ., de Graaf, MA., Joemai, RMS., Nieman, K., van Vliet, LJ., van Walsum, T., Lelieveldt, BPF. & Niessen, WJ., 2014, In : The Journal of Nuclear Medicine. 55, 1, p. 50-57 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  173. Ankle-brachial index, cognitive impairment and cerebrovascular disease in a Chinese population

    Hilal, S., Saini, M., Tan, CS., Catindig, JA., Dong, YH., Leon, LBS., Niessen, WJ., Vrooman, H., Wong, TY., Chen, C., Venketasubramanian, N. & Ikram, MK., 2014, In : Neuroepidemiology. 42, 2, p. 131-138 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  174. Apolipoprotein E genotype influences spatial distribution of cerebral microbleeds

    Loehrer, E., Ikram, MA., Akoudad, S., Vrooman, HA., van der Lugt, A., Niessen, WJ., Hofman, A. & Vernooij, MW., 2014, In : Neurobiology of Aging: age-related phenomena, neurodegeneration and neuropathology. 35, 4, p. 899-905 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  175. Atherosclerotic plaque component segmentation in combined MRI and CTA data incorporating class label uncertainty

    van Engelen, A., Niessen, WJ., Klein, S., Groen, HC., Verhagen, HJM., Wentzel, JJ., van der Lugt, A. & Bruijne, M. D., 2014, In : PLoS ONE. 9, p. 1-14 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  176. Automatic Classification of Calcification in the Coronary Vessel Tree

    Shazhad, R., van Vliet, LJ., Niessen, WJ. & van Walsum, T., 2014, MICCAI Challenge on Automated Coronary Artery Scoring, orCAScore 2014. s.n. (ed.). MICCAI, p. 14-21 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  177. Cerebral microbleeds and cognition: The epidemiology of dementia in singapore study

    Hilal, S., Saini, M., Tan, CS. & Niessen, WJ., 2014, In : Alzheimer Disease and Associated Disorders. 28, 2, p. 106-112 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  178. Cerebral microbleeds are associated with the progression of ischemic vascular lesions

    Akoudad, S., Ikram, MA., Koudstaal, PJ., Hofman, A. & Niessen, WJ., 2014, In : Cerebrovascular Diseases. 37, 5, p. 382-388 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  179. Cerebral small vessel disease affects white matter microstructure in mild cognitive impairment

    Papma, JM., de Groot, M., de Koning, I., Mattace-Raso, FU., van der Lugt, A., Vernooij, MW., Niessen, WJ., van Swieten, JC., Koudstaal, PJ., Prins, ND. & Smits, M., 2014, In : Human Brain Mapping. 35, p. 2836-2851 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  180. Comparison of heuristic evaluation and think aloud methods: A study in radiotherapy contouring software

    Ramkumar, A., Song, Y., Varga, E., Niessen, WJ., Laprie, A., Rowland, B. & Freudenthal, A., 2014, Proceedings of the international symposium of human factors and ergonomics in healthcare. s.n. (ed.). s.l.: Sage, p. 230-237 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

  181. Development and validation of intracranial thrombus segmentation on CT angiography in patients with acute ischemic stroke

    Santos, EMM., Marquering, HA., Berkhemer, OA., van der Zwam, W., van der Lugt, A., Majoie, CBLM. & Niessen, WJ., 2014, In : PLoS ONE. 9, 7, p. 1-8 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  182. Diagnostic classification of arterial spin labeling and structural MRI in presenile early-stage dementia

    Bron, EE., Steketee, RME., Houston, G., Oliver, RA., Achterberg, HC., Loog, M., van Swieten, JC., Hammers, A., Niessen, WJ., Smits, M. & Klein, S., 2014, In : Human Brain Mapping. 35, p. 4916-4931 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  183. Feasibility of multi-modal deformable registration for head and neck tumor treatment planning

    Fortunati, VF., Verhaart, RF., Angeloni, F., van der Lugt, A., Niessen, WJ., Veenland, JF., Paulides, M. & van Walsum, T., 2014, In : International Journal of Radiation: Oncology - Biology - Physics. 90, p. 85-93 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  184. Free-form deformation using lower-order B-spline for nonrigid image registration

    Sun, W., Niessen, WJ. & Klein, S., 2014, In : Lecture Notes in Computer Science. 8673, PART 1, p. 194-201 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  185. Free-form deformation using lower-order B-spline for nonrigid image registration.

    Sun, W., Niessen, WJ. & Klein, S., 2014, MICCAI 2014, LNCS 8637, PART1. Golland, P. & et al (eds.). Zwitserland: Springer, p. 194-201 8 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterScientific

  186. Global and focal white matter integrity in breast cancer survivors 20 years after adjuvant chemotherapy

    Koppelmans, V., de Groot, M., de Ruiter, MB., Boogerd, W., Seynaeve, C., Vernooij, MW., Niessen, WJ., Schagen, SB. & Breteler, MMB., 2014, In : Human Brain Mapping. 35, p. 889-899 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  187. Hippocampal shape is predictive for the development of dementia in a normal, elderly population

    Achterberg, HC., van der Lijn, F., den Heijer, T., Vernooij, MW., Ikram, MA., Niessen, WJ. & Bruijne, M. D., 2014, In : Human Brain Mapping. 35, p. 2359-2371 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  188. Human computer interaction in segmenting organs at risk for radiotherapy: A pilot study

    Ramkumar, A., Dolz, J., Kirisli, HA., Varga, E., Schimek-Jasch, T., Nestle, U., Massoptier, L., Stappers, PJ., Niessen, WJ. & Song, Y., 2014, Multimodal imaging towards individualized radiotherapy treatments. Massoptier, L. & Song, Y. (eds.). Lille: AQUILAB, p. 69-79 11 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  189. IT Infrastructure to Support the Secondary Use of Routinely Acquired Clinical Imaging Data for Research

    Leung, KYE., van der Lijn, F., Vrooman, HA., Sturkenboom, MCJM. & Niessen, WJ., 2014, In : NeuroInformatics. p. 1-17 17 p.

    Research output: Contribution to journalArticleScientificpeer-review

  190. Influence of image registration on ADC images computed from free-breathing diffusion MRIs of the abdomen

    Guyader, J-M., Bernardin, L., Douglas, NHM., Poot, DHJ., Niessen, WJ. & Klein, S., 2014, In : Progress in Biomedical Optics and Imaging. 9034, p. 1-16 16 p.

    Research output: Contribution to journalConference articleScientificpeer-review

  191. Influence of image registration on apparent diffusion coefficient images computed from fee-breathing diffusion MR images of the abdomen

    Guyader, J-M., Bernardin, L., Douglas, NHM., Poot, DHJ., Niessen, WJ. & Klein, S., 2014, In : Journal of Magnetic Resonance. p. 1-16 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  192. Interactive local super-resolution reconstruction of whole-body MRI mouse data: A pilot study with applications to bone and kidney metastases

    Dzyubachyk, O., Khmelinskii, A., Plenge, E., Kok, P., Snoeks, TJA., Poot, DHJ., Lowik, CWGM., Botha, CP., Niessen, WJ., van der Weerd, L., Meijering, E. & Lelieveldt, BPF., 2014, In : PLoS ONE. 9, 9, p. 1-10 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  193. Joint intensity-and-point based registration of ree-hand B-mode ultrasound and MRI of the carotid artery

    Carvalho, DDB., Klein, S., Akkus, Z., van Dijk, AC., Tang, H., Selwaness, M., Schinkel, AFL., Bosch, JG., van der Lugt, A. & Niessen, WJ., 2014, In : Medical Physics. 41, p. 052904-052904 1 p.

    Research output: Contribution to journalArticleScientificpeer-review

  194. Lumen segmentation and motion estimation in B-mode and contrast-enhanced ultrasound images of the carotid artery in patients with atherosclerotic plaque

    Carvalho, DDB., Akkus, Z., van den Oord, SCH., Schinkel, AFL., van der Steen, AFW., Niessen, WJ., Bosch, JG. & Klein, S., 2014, In : IEEE Transactions on Medical Imaging. in press, p. 1-12 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  195. Microvascular network alterations in retina of subjects with cerebral small vessel disease

    Hilal, S., Ong, Y-T., Cheung, CY., Tan, CS., Venketasubramanian, N., Niessen, WJ., Vrooman, H., Anuar, AR., Chew, M., Chen, C., Wong, TY. & Ikram, MK., 2014, In : Neuroscience Letters. 577, p. 95-100 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  196. Non-rigid groupwise image registration for motion compensation in quantitative MRI

    Huizinga, W., Poot, DHJ., Guyader, J-M., Niessen, WJ. & et al, ., 2014, In : Lecture Notes in Computer Science. 8545, p. 184-193 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  197. Nonrigid motion compensation in B-mode and contrast enhanced ultrasound image sequences of the carotid artery

    Carvalho, DDB., Akkus, Z., Bosch, JG., van den Oord, SCH., Niessen, WJ. & Klein, S., 2014, In : Progress in Biomedical Optics and Imaging. 9034, art nr 90340N, p. 1-3 3 p.

    Research output: Contribution to journalConference articleScientificpeer-review

  198. Older age relates to worsening of fine motor skills: A population based study of middle-aged and elderly persons

    Hoogendam, YY., van der Lijn, F., Vernooij, MW., Hofman, A., Niessen, WJ. & et al, ., 2014, In : Frontiers in Aging Neuroscience. 6, SEP, art nr 259, p. 1-4 4 p.

    Research output: Contribution to journalArticleScientificpeer-review

  199. Oriented Gaussian mixture models for non-rigid 2D/3D coronary artery registration

    Baka, N., Metz, CT., Schultz, C., Geuns, RJ. V., Niessen, WJ. & van Walsum, T., 2014, In : IEEE Transactions on Medical Imaging. 33, p. 1023-1034 12 p.

    Research output: Contribution to journalArticleScientific

  200. Quantification of heterogeneity as a biomarker in tumor imaging: a systematic review

    Alic, L., Niessen, WJ. & Veenland, JF., 2014, In : PLoS ONE. 9, 10, p. 1-15 15 p.

    Research output: Contribution to journalArticleScientificpeer-review

  201. Randomly perturbed free-form deformation for nonrigid image registration

    Sun, W., Niessen, WJ. & Klein, S., 2014, In : Lecture Notes in Computer Science. 8545, p. 62-71 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  202. Semi-automatic MRI segmentation and volume quantification of intra-plaque hemorrhage

    Tang, H., Selwaness, M., Hameeteman, R., van Dijk, A., van der Lugt, A., Witteman, JC., Niessen, WJ., van Vliet, L. & van Walsum, T., 2014, In : International Journal of Computer Assisted Radiology and Surgery. 10, 1, p. 1-8 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  203. Structural and microstructural brain changes predict impairment in daily functioning

    Verlinden, VJA., van der Geest, JN., de Groot, M., Hofman, A., Niessen, WJ., van der Lugt, A., Vernooij, MW. & Ikram, MA., 2014, In : The American Journal of Medicine. 127, 11, p. 1089-1096 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  204. Symmetry based computer aided segmentation of occluded cerebral arteries on CT angiography

    Santos, EMM., Marquering, HA., Berkhemer, OA., van der Zwam, W., van der Lugt, A., Majoie, CB. & Niessen, WJ., 2014, 13th Mediterranean Conference on Medical and Biological Engineering and Computing 2013, MEDICON 2013. nb (ed.). nb: nb, p. 237-240 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  205. TMEM106B influences volume of left-sided temporal lobe and Interhemispheric structures in the general population

    Adams, HHH., Verhaaren, BFJ., Vrooman, HA., Uitterlinden, AG., Hofman, A., van Duijn, CM., van der Lugt, A., Niessen, WJ., Vernooij, MW. & Ikram, MA., 2014, In : Biological Psychiatry. 76, 6, p. 503-508 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  206. The role of cerebellar volume in cognition in the general elderly population

    Hoogendam, YY., van der Geest, JN., Niessen, WJ., van der Lugt, A., Hofman, A., Vernooij, MW. & Ikram, MA., 2014, In : Alzheimer Disease and Associated Disorders. 28, 4, p. 352-357 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  207. Three-dimensional carotid ultrasound plaque texture predicts vascular events

    van Engelen, A., Wannarong, T., Parraga, G., Niessen, WJ., Fenster, A., Spence, JD. & Bruijne, M., 2014, In : Stroke. 45, p. 2695-2701 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  208. Three-dimensional inversion recovery manganese-enhanced MRI of mouse brain using super-resolution reconstruction to visualize nuclei involved in higher brain function

    Plenge, E., Poole, DS., Poot, DHJ., Lakke, EAJF., Niessen, WJ., Meijering, E. & van der Weerd, L., 2014, In : NMR in Biomedicine. 27, p. 749-759 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  209. Tract-specific white matter degeneration in aging. The Rotterdam study.

    de Groot, M., Ikram, MA., Akoudad, S., Krestin, GP., Hofman, A., van der Lugt, A., Niessen, WJ. & Vernooij, MW., 2014, In : Alzheimer's & Dementia. p. 1-10 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  210. Visceral adipose tissue: The link with esophageal adenocarcinoma

    Massl, R., van Blankenstein, M., Jeumink, S., Hermans, JJ., de Haan, MC., Stoker, J., Koek, M., Niessen, WJ., Steverberg, EW., Looman, CW. & Kuipers, EJ., 2014, In : Scandinavian Journal of Gastroenterology. 49, 4, p. 449-457 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  211. Wavelet based free-form deformations for nonrigid registration

    Sun, W., Niessen, WJ. & Klein, S., 2014, In : Progress in Biomedical Optics and Imaging. 9034, art nr 90343N, p. 1-4 4 p.

    Research output: Contribution to journalConference articleScientificpeer-review

  212. 2013
  213. Additive Value of Semiautomated Quantification of Coronary Artery Disease Using Cardiac Computed Tomographic Angiography to Predict Future Acute Coronary Syndrome

    Versteylen, MO., Kietselaer, BL., Dagnelie, PC., Joosen, IA., Dedic, A., Raaijmakers, RH., Wildberger, JE., Nieman, K., Crijns, HJ., Niessen, WJ. & Daemen, MJ., 2013, In : Journal of the American College of Cardiology. 61, 22, p. 2296-2305 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  214. Automatic carotid artery distensibility measurements from CTA using nonrigid registration

    Hameeteman, K., Rozie, S., Metz, CT., Manniesing, R., van Walsum, T., van der Lugt, A., Niessen, WJ. & Klein, S., 2013, In : Medical Image Analysis. 17, p. 515-524 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  215. Automatic quantification of epicardial fat volume on non-enhanced cardiac CT scans using a multi-atlas segmentation approach

    Shahzad, R., Bos, D., Metz, CT., Rossi, A., Kirisli, H., van der Lugt, A., Klein, S., Witteman, J., de Feyter, P., Niessen, WJ. & van Walsum, T., 2013, In : Medical Physics. 40, 9, p. 1-9 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  216. Automatic segmentation, detection and quantification of coronary artery stenoses on CTA

    Shahzad, R., Kirisli, H., Metz, CT., Tang, H., Schaap, M., van Vliet, LJ., Niessen, WJ. & van Walsum, T., 2013, In : International Journal of Cardiovascular Imaging. p. 1-13 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  217. Brain cortical thickness in the general elderly population: The Rotterdam Scan Study

    Velsen, EFS., Vernooij, MW., Vrooman, HA., van der Lugt, A., Breteler, MMB., Hofman, A., Niessen, WJ. & Ikram, MA., 2013, In : Neuroscience Letters. 550, p. 189-194 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  218. Can DCE-MRI Explain the Heterogeneity in Radiopeptide Uptake Imaged by SPECT in a Pancreatic Neuroendocrine Tumor Model?

    Bol, K., Haeck, JC., Groen, HC., Niessen, WJ., de Jong, M. & Veenland, JF., 2013, In : PLoS ONE. 8, 10, p. 1-11 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  219. Carotid artery wall segmentation by coupled surface graph cuts

    Arias, A., Petersen, J., van Engelen, A., Tang, H., Selwaness, M., Witteman, JCM., van der Lugt, A., Niessen, WJ. & Bruijne, M. D., 2013, Lecture Notes in Computer Science. s.n. (ed.). Berlin: Springer Verlag, p. 38-47 10 p. (Lecture Notes in Computer Science; vol. 7766).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  220. Carotid wall volume quantification from magnetic resonance images using deformable model fitting and learning-based correction of systematic errors

    Hameeteman, K., Klooster, R. V. ., Selwaness, M., van der Lugt, A., Witteman, JCM., Niessen, WJ. & Klein, S., 2013, In : Physics in Medicine and Biology. 58, p. 1605-1623 19 p.

    Research output: Contribution to journalArticleScientificpeer-review

  221. Cerebral microbleeds are related to loss of white matter structural integrity

    Akoudad, S., de Groot, M., Koudstaal, PJ., van der Lugt, A., Niessen, WJ., Hofman, A., Ikram, MA. & Vernooij, MW., 2013, In : Neurology. 81, 22, p. 1930-1937 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  222. Changes in Normal-Appearing White Matter Precede Development of White Matter Lesions

    de Groot, M., Verhaaren, BFJ., Boer, R. D., Klein, S., Hofman, A., van der Lugt, A., Ikram, MA., Niessen, WJ. & Vernooij, MW., 2013, In : Stroke. 44, 4, p. 1037-1042 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  223. High Blood Pressure and Cerebral White Matter Lesion Progression in the General Population

    Verhaaren, BFJ., Vernooij, MW., Boer, R. D., Hofman, A., Niessen, WJ., van der Lugt, A. & Ikram, MA., 2013, In : Hypertension. 61, 6, p. 1354-1359 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  224. Image registration improves human knee cartilage T1 mapping with delayed gadolinium-enhanced MRI of cartilage (dGEMRIC)

    Bron, EE., Tiel, J., Smit, H., Poot, DHJ., Niessen, WJ., Krestin, GP., Weinans, HH., Oei, E., Kotek, G. & Klein, S., 2013, In : European Radiology. 23, 1, p. 246-252 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  225. Improving alignment in Tract-based spatial statistics: Evaluation and optimization of image registration

    de Groot, M., Vernooij, MW., Klein, S., Arfan Ikram, M., Vos, FM., Smith, SM., Niessen, WJ. & Andersson, JLR., 2013, In : NeuroImage. 76, p. 400-411 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  226. Lumen segmentation and stenosis quantification of atherosclerotic carotid arteries in CTA utilizing a centerline intensity prior

    Tang, H., van Walsum, T., Hameeteman, K., Shahzad, R., van Vliet, LJ. & Niessen, WJ., 2013, In : Medical Physics. 40, 5, p. 1-13 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  227. Quantification of Intracranial Aneurysm Morphodynamics from ECG-gated CT Angiography

    Firouzian, A., Manniesing, R., Metz, CT., Risselada, R., Klein, S., van Kooten, F., Sturkenboom, MCJ., van der Lugt, A. & Niessen, WJ., 2013, In : Academic Radiology. 20, 1, p. 52-58 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  228. Regional heterogeneity changes in DCE-MRI as response to isolated limb perfusion in experimental soft-tissue sarcomas

    Alic, L., van Vliet, M., Wielopolski, PA., ten Hagen, TLM., Dijke, CF., Niessen, WJ. & Veenland, JF., 2013, In : Contrast Media & Molecular Imaging. 8, 4, p. 340-349 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  229. Retinal vascular calibers associate differentially with cerebral gray matter and white matter atrophy

    Ikram, MK., de Jong, FJ., Vernooij, MW., Hofman, A., Niessen, WJ., van der Lugt, A., Klaver, CC. & Ikram, MA., 2013, In : Alzheimer Disease and Associated Disorders. 27, 4, p. 351-355 5 p.

    Research output: Contribution to journalArticleScientificpeer-review

  230. Simultaneous Multiresolution Strategies for Nonrigid Image Registration

    Sun, W., Niessen, WJ., van Stralen, M. & Klein, S., 2013, In : IEEE Transactions on Image Processing. 22, 12, p. 4905-4917 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  231. Standardized evaluation framework for evaluating coronary artery stenosis detection, stenosis quantification and lumen segmentation algorithms in computed tomography angiography

    Kirisli, HA., Schaap, M., Metz, CT., Dharampal, AS., Meijboom, WB., Papadopoulou, SL., Dedic, A., Nieman, K., de Graaf, MA., Meijs, MFL., Cramer, MJ., Broersen, A., Cetin, S., Eslami, A., Florez-Valencia, L., Lor, KL., Matuszewski, B., Melki, I., Mohr, B., Oksuz, I. & 18 othersShahzad, R., Wang, C., Kitslaar, P. H., Unal, G., Katouzian, A., Orkisz, M., Chen, CM., Precioso, F., Najman, L., Masood, S., Unay, D., van Vliet, LJ., Moreno, R., Goldenberg, R., Vucini, E., Krestin, GP., Niessen, WJ. & van Walsum, T., 2013, In : Medical Image Analysis. 17, p. 859-876 18 p.

    Research output: Contribution to journalArticleScientificpeer-review

  232. Statistical coronary motion models for 2D+t/3D registration of X-ray coronary angiography and CTA

    Baka, N., Metz, CT., Schultz, C., Neefjes, L., Geuns, RJ. V., Lelieveldt, BPF., Niessen, WJ., van Walsum, T. & Bruijne, M. D., 2013, In : Medical Image Analysis. 17, p. 698-709 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  233. The Relation of Uric Acid to Brain Atrophy and Cognition: The Rotterdam Scan Study

    Verhaaren, BFJ., Vernooij, MW., Dehghan, A., Vrooman, HA., Boer, R. D., Hofman, A., Witteman, JCM., Niessen, WJ., Breteler, MMB., van der Lugt, A. & Arfan Ikram, M., 2013, In : Neuroepidemiology. 41, p. 29-34 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  234. Tissue segmentation of head and neck CT images for treatment planning: A multiatlas approach combined with intensity modeling

    Fortunati, V., Verhaart, RF., van der Lijn, F., Niessen, WJ., Veenland, JF., Paulides, MM. & van Walsum, T., 2013, In : Medical Physics. 40, 7, p. 1-14 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  235. Total antioxidant capacity of the diet and major neurologic outcomes in older adults

    Devore, EE., Feskens, E., Ikram, MA., den Heijer, T., Vernooij, MW., van der Lijn, F., Hofman, A., Niessen, WJ. & Breteler, MMB., 2013, In : Neurology. 80, 5, p. 904-910 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  236. 2012
  237. A genome-wide association study identifies five loci influencing facial morphology in Europeans

    Liu, F., van der Lijn, F., Schurmann, C., Chakravarty, MM., Hysi, PG., Wollstein, A., Lao, O., Bruijne, M. D., Ikram, MA., Lugt, A., Rivadeineira, F., Uitterlinden, AG., Hofman, A., Niessen, WJ. & Kayser, M., 2012, In : PLoS Genetics (Print). 8, 9, p. 1-13 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  238. Automated Brain Structure Segmentation Based on Atlas Registration and Appearance Models

    van der Lijn, F., Bruijne, M. D., Klein, S., den Heijer, T., Hoogendam, YY., van der Lugt, A., Breteler, MMB. & Niessen, WJ., 2012, In : IEEE Transactions on Medical Imaging. 31, 2, p. 276-286 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  239. Automated Measurement of Local White Matter Lesion Volume

    van der Lijn, F., Verhaaren, BFJ., Ikram, MA., Klein, S., Bruijne, M. D., Vrooman, H., Vernooij, MW., Hammers, A., Rueckert, D., van der Lugt, A., Breteler, MMB. & Niessen, WJ., 2012, In : NeuroImage. 59, 4, p. 3901-3908 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  240. Automatic detection of calcified lesions in the descending aorta using contrast enhanced CT scans

    Shahzad, R., Schaap, M., Goncalves, FB., Metz, C., Tang, H., van Walsum, T., Moelker, A., van Vliet, LJ. & Niessen, WJ., 2012, 9th IEEE International Symposium on Biomedical Imaging (ISBI). sn (ed.). Barcelona: s.n., p. 250-253 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  241. Cardiac MR perfusion image processing techniques: A survey

    Gupta, V., Kiri¿li, HA., Hendriks, EA., van der Geest, R. J., van de Giessen, M., Niessen, WJ., Reiber, JHC. & Lelieveldt, BPF., 2012, In : Medical Image Analysis. 16, 4, p. 767-785 19 p.

    Research output: Contribution to journalArticleScientificpeer-review

  242. Cardiac motion-corrected iterative cone-beam CT reconstruction using a semi-automatic minimum cost path-based coronary centerline extraction

    Isola, AA., Metz, C., Schaap, M., Klein, S., Grass, M. & Niessen, WJ., 2012, In : Computerized Medical Imaging and Graphics. 36, 3, p. 215-226 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  243. Carotid Atherosclerotic Plaque Progression and Change in Plaque Composition Over Time: A 5-Year Follow-Up Study Using Serial CT Angiography

    van Gils, MJ., Vukadinovic, D., van Dijk, AC., Dippel, DWJ., Niessen, WJ. & Lugt, A., 2012, In : American Journal of Neuroradiology. 33, 77, p. 1267-1273 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  244. Carotid atherosclerotic plaque progression and change in plaque composition over time: A 5-year follow-up study with serial CT angiography

    van Gils, MJ., Vukadinovic, D., Dippel, DWJ., Niessen, WJ. & van der Lugt, A., 2012, In : American Journal of Neuroradiology. 33, p. 1267-1273

    Research output: Contribution to journalArticleScientificpeer-review

  245. Cerebral microbleeds are associated with worse cognitive function: the Rotterdam Scan Study

    Poels, MMF., Ikram, MA., van der Lugt, A., Hofman, A., Niessen, WJ., Krestin, GP., Breteler, MMB. & Vernooij, MW., 2012, In : Neurology. 78, 5, p. 326-333 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  246. Common variants at 12q14 and 12q24 are associated with hippocampal volume

    Bis, JC., DeCarli, C., Smith, AV., van der Lijn, F., Crivello, F., Fornage, M., Debette, S., den Heijer, T., Schmidt, H., Niessen, WJ., van Duijn, CM., Mosley, TH., Schmidt, R., Tzourio, C., Launer, LJ., Ikram, MA. & Seshadri, S., 2012, In : Nature Genetics. 44, 5, p. 545-551 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  247. Common variants at 12q15 and 12q24 are associated with infant head circumference

    Taal, HR., St Pourcain, B., Thiering, E., Niessen, WJ. & et al, ., 2012, In : Nature Genetics. 44, 5, p. 532-538 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  248. Common variants at 6q22 and 17q21 are associated with intracranial volume

    Ikram, MA., Fornage, M., Smith, AV., Niessen, WJ. & etal, ., 2012, In : Nature Genetics. 44, 5, p. 539-544 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  249. Comprehensive visualization of multi-modal cardiac imaging data for assessment of coronary artery disease: first clinical results of the SMARTVis tool

    Kirisli, HA., Gupta, V., Kirschbaum, SW., Rossi, A., Metz, CT., Schaap, M., Geuns, RJ., Mollet, N., Lelieveldt, BPF., Reiber, JHC., van Walsum, T. & Niessen, WJ., 2012, In : International Journal of Computer Assisted Radiology and Surgery. 7, 4, p. 557-571 15 p.

    Research output: Contribution to journalArticleScientificpeer-review

  250. Estimating 3D lumen centerlines of carotid arteries in free-hand acquisition ultrasound

    Carvalho, DDB., Klein, S., Akkus, Z., ten Kate, GL., Schinkel, AFL., Bosch, JG., van der Lugt, A. & Niessen, WJ., 2012, In : International Journal of Computer Assisted Radiology and Surgery. 7, 2, p. 207-215 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  251. Global and focal brain volume in long-term breast cancer survivors exposed to adjuvant chemotherapy

    Koppelmans, V., de Ruiter, MB., van der Lijn, F., Boogerd, W., Seynaeve, C., van der Lugt, A., Vrooman, HA., Niessen, WJ., Breteler, MMB. & Schagen, SB., 2012, In : Breast Cancer Research and Treatment. 132, p. 1099-1106 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  252. Lumen Segmentation of atherosclerotic carotid arteries in CTA

    Tang, H., van Walsum, T., Hameeteman, K., Schaap, M., van Vliet, LJ. & Niessen, WJ., 2012, 9th IEEE International Symposium on Biomedical Imaging (ISBI). sn (ed.). sn: IEEE, p. 274-277 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  253. Multi-feature-based plaque characterization in ex vivo MRI trained by registration to 3D histology

    van Engelen, A., Niessen, WJ., Klein, S., Groen, HC., Verhagen, HJM., Wentzel, JJ., van der Lugt, A. & Bruijne, M. D., 2012, In : Physics in Medicine and Biology. 57, p. 1-17 17 p.

    Research output: Contribution to journalArticleScientificpeer-review

  254. Regression-based cardiac motion prediction from single-phase CTA

    Metz, CT., Baka, N., Kirisli, H., Schaap, M., Klein, S., Neefjes, LA., Mollet, NR., Lelieveldt, BPF., Bruijne, M. D., Niessen, WJ. & van Walsum, T., 2012, In : IEEE Transactions on Medical Imaging. 31, 6, p. 1311-1325 15 p.

    Research output: Contribution to journalArticleScientificpeer-review

  255. Robust motion correction in the frequency domain of cardiac MR stress perfusion sequences

    Gupta, V., van de Giessen, M., Kirisli, H., Kirschbaum, SW., Niessen, WJ. & Lelieveldt, BPF., 2012, In : Lecture Notes in Computer Science. 7510, p. 667-674 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  256. Semiautomatic Carotid Lumen Segmentation for Quantification of Lumen Geometry in Multispectral MRI

    Tang, H., van Walsum, T., van Onkelen, RS., Hameeteman, K., Klein, S., Schaap, M., Tori, FL., van den Bouwhuijsen, QJA., Witteman, JCM., van der Lugt, A., van Vliet, LJ. & Niessen, WJ., 2012, In : Medical Image Analysis. 16, 6, p. 1202-1215 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  257. Statistical shape model based femur kinematics from biplane fluoroscopy

    Baka, N., Bruijne, M. D., van Walsum, T., Kaptein, BL., Giphart, JE., Schaap, M., Niessen, WJ. & Lelieveldt, BPF., 2012, In : IEEE Transactions on Medical Imaging. 31, 8, p. 1573-1583 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  258. Structural and diffusion MRI measures of the hippocampus and memory performance

    den Heijer, T., van der Lijn, F., Vernooij, M. W., de Groot, M., Koudstaal, PJ., van der Lugt, A., Krestin, GP., Hofman, A., Niessen, WJ. & Breteler, MMB., 2012, In : NeuroImage. 63, 4, p. 1782-1789 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  259. Super-Resolution Methods in MRI: Can They Improve the Trade-Off Between Resolution

    Plenge, E., Poot, DHJ., Bernsen, MR., Kotek, G., Houston, B., Wielopolski, P., van der Weerd, L., Niessen, WJ. & Meijering, E., 2012, In : Magnetic Resonance in Medicine. 68, 6, p. 1983-1993 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  260. Super-resolution reconstruction of whole-body MRI mouse data: an interactive approach

    Khmelinskii, A., Kok, P., Dzyubachyk, O., Poot, DHJ., Suidgeest, E., Botha, CP., Niessen, WJ., van der Weerd, L., Meijering, E. & Lelieveldt, BPF., 2012, Proceedings of the 9th Symposium on Biomedical Imaging 2012: From Nano to Macro. Frangi, A., Santos, A., Ober, R. & Ruekert, D. (eds.). Piscataway, NJ, USA: IEEE Society, p. 1723-1726 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  261. The Thyroid Hormone Receptor Alpha Locus and White Matter Lesions: A Role for the Clock Gene REV-ERBa

    Medici, R., Ikram, MA., van der Lijn, F., den Heijer, T., Vernooij, MW., Hofman, A., Niessen, WJ., Visser, TJ., Breteler, MMB. & Peeters, R., 2012, In : Thyroid. 22, 11, p. 1181-1186 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  262. Vascular risk factors, apolipoprotein E, and hippocampal decline on magnetic resonance imaging over a 10-year follow-up

    den Heijer, T., van der Lijn, F., Ikram, A. & Niessen, WJ., 2012, In : Alzheimer's & Dementia. 8, 5, p. 417-425 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  263. Vessel Specific Coronary Artery Calcium Scoring: An Automatic System

    Shahzad, R., van Walsum, T., Schaap, M., Rossi, A., Klein, S., Wuestink, AC., de Feyter, P., van Vliet, LJ. & Niessen, WJ., 2012, In : Academic Radiology. p. 1-9 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  264. 2011
  265. 2D-3D shape reconstruction of the distal femur from stereo X-Ray imaging using statistical shape models

    Baka, N., Kaptein, BL., Bruijne, M. D., van Walsum, T., Giphart, JE., Niessen, WJ. & Lelieveldt, BP., 2011, In : Medical Image Analysis. 15, p. 840-850 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  266. A patient-specific visualization tool for comprehensive analysis of coronary CTA and perfusion MRI data

    Kirisli, HA., Gupta, V., Kirschbaum, S., Neefjes, L., Geuns, RJ., Mollet, N., Lelieveldt, BPF., Reiber, JHC., van Walsum, T. & Niessen, WJ., 2011, In : Proceedings of SPIE- International Society for Optical Engineering. 7964, p. 1-4 4 p.

    Research output: Contribution to journalConference articleScientificpeer-review

  267. Alignment of 4D Coronary CTA with Monoplane X-Ray Angiography

    Metz, C., Schaap, M., Klein, S., Rijnbeek, P., Neefjes, L., Mollet, N., Schultz, C., Serruys, P., Niessen, WJ. & van Walsum, T., 2011, MICCAI workshop: Augmented Environments for Computer Assisted Interventions. sn (ed.). Springer, p. 1-9 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  268. Association Between Carotid Artery Plaque Ulceration and Plaque Composition Evaluated With Multidetector CT Angiography

    Homburg, PJ., Rozie, S., van Gils, MJ., van den Bouwhuijsen, QJA., Niessen, WJ., Dippel, DWJ. & van der Lugt, A., 2011, In : Stroke. 42, 2, p. 367-372 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  269. Automated bone removal in CT angiography: comparison of methods based on single energy and dual energy scans

    Straten, M., Schaap, M., Dijkshoorn, ML., Greuter, M., van der Lugt, A., Krestin, GP. & Niessen, WJ., 2011, In : Medical Physics. 38, 11, p. 6128-6137 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  270. Automated versus manual segmentation of atherosclerotic carotid plaque volume and components in CTA: associations with cardiovascular risk factors

    Vukadinovic, D., Rozie, S., van Gils, M., van Walsum, T., Manniesing, R., van der Lugt, A. & Niessen, WJ., 2011, In : International Journal of Cardiovascular Imaging. p. 1-11 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  271. Comparison of Shape Regression Methods under Landmark Position Uncertainty

    Baka, N., Metz, C., Schaap, M., Lelieveldt, BP., Niessen, WJ. & Bruijne, M. D., 2011, In : Lecture Notes in Computer Science. 6892, p. 434-441 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  272. Developing a tool for the validation of quantitative DCE-MRI

    Bol, K., Haeck, JC., Alic, L., Bernsen, MR., de Jong, M., Veenland, JF. & Niessen, WJ., 2011, In : Proceedings of SPIE- International Society for Optical Engineering. 7965, p. 1-4 4 p.

    Research output: Contribution to journalConference articleScientificpeer-review

  273. Estimating 3D lumen centerlines of carotid arteries in free-hand acquisition ultrasound

    Carvalho, DDB., Klein, S., Akkus, Z., ten Kate, GL., Schinkel, AFL., Bosch, JG., van der Lugt, A. & Niessen, WJ., 2011, In : International Journal of Computer Assisted Radiology and Surgery. p. 1-9 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  274. Evaluation framework for carotid bifurcation lumen segmentation and stenosis grading

    Hameeteman, K., Zuluaga, MA., Freiman, M., Joiskowicz, L., Cuisenaire, O., Florez Valencia, L., Gulsun, MA., Krissian, K., Mille, J., Wong, WCK., Orkisz, M., Tek, H., Hernandez Hoyos, M., Benmansour, F., Chung, ACS., Rozie, S., van Gils, MJ., van der Borne, L., Sosna, J., Berman, P. & 10 othersCohen, N., Douek, P., Sanchez, I., Aissat, M., Schaap, M., Metz, C., Krestin, GP., van der Lugt, A., Niessen, WJ. & van Walsum, T., 2011, In : Medical Image Analysis. 8, p. 477-488 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  275. Facilitating Tumor Functional Assessment by Spatially Relating 3D Tumor Histology and In Vivo MRI: Image Registration Approach

    Alic, L., Haeck, JC., Bol, K., Klein, S., van Tiel, ST., Wielepolski, PA., de Jong, M., Niessen, WJ., Bernsen, MR. & Veenland, JF., 2011, In : PLoS ONE. 6, 8

    Research output: Contribution to journalArticleScientificpeer-review

  276. Genetic determination of human facial morphology: links between cleft-lips and normal variation

    Boehringer, S., van der Lijn, F., Liu, F., Gunther, S., Sinigerova, S., Nowak, S., Ludwig, KU., Herberz, R., Klein, S., Hofman, A., Uitterlinden, AG., Niessen, WJ., Breteler, MMB., van der Lugt, A., Wurtz, RP., Nothen, MM., Horsthemke, B., Wieczorek, D., Mangold, E. & Kayser, M., 2011, In : European Journal of Human Genetics. 19, p. 1192-1197 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  277. Genetic risk factors for cerebral small vessel disease in hypertensive patients from a genetically isolated population

    Schuur, M., van Swieten, JC., Schol-Gelok, S., Ikram, MA., Niessen, WJ., Vernooij, M. W., Liu, F., Isaacs, A., Boer, R., de Koning, I., Vrooman, HA., Oostra, BA., van der Lugt, A., Breteler, MMB. & van Duijn, CM., 2011, In : Journal of Neurology, Neurosurgery and Psychiatry. 82, p. 41-44 4 p.

    Research output: Contribution to journalArticleScientificpeer-review

  278. Heterogeneity in DCE-MRI parametric maps: a biomarker for treatment response?

    Alic, L., van Vliet, M., Dijke, CF., Eggermont, AMM., Veenland, JF. & Niessen, WJ., 2011, In : Physics in Medicine and Biology. 56, p. 1601-1616 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  279. Improved tissue segmentation by including an MR acquisition model

    Poot, D., Bruijne, M. D., Vernooij, M. W., Arfan Ikram, M. & Niessen, WJ., 2011, Multimodal Brain Image Analysis. Liu, T., Shen, D., Ibanez, J. & Tao, X. (eds.). Springer, p. 1-8 8 p. (Lecture Notes in Computer Science; vol. 7012).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  280. Incidence, treatment, and case-fatality of non-traumatic subarachnoid haemorrhage in the Netherlands

    Risselada, R., de Vries, LM., Dippel, DWJ., van Kooten, F., van der Lugt, A., Niessen, WJ., Firouzian, A., Stricker, BH. & Sturkenboom, MCJM., 2011, In : Clinical Neurology and Neurosurgery. 113, 6, p. 483-487 5 p.

    Research output: Contribution to journalArticleScientificpeer-review

  281. Intracranial aneurysm segmentation in 3D CT angiography: Method and quantitative validation with and without prior noise filtering

    Firouzian, A., Manniesing, R., Flach, ZH., Risselada, R., van Kooten, F., Sturkenboom, MCJM., van der Lugt, A. & Niessen, WJ., 2011, In : European Journal of Radiology. 79, 2, p. 299-304 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  282. Multispectral MRI centerline tracking in carotid arteries

    Tang, H., van Walsum, T., van Onkelen, RS., Klein, S., Hameeteman, K., Schaap, M., van den Bouwhuijsen, QJA., Witteman, JCM., van der Lugt, A., Niessen, WJ. & van Vliet, LJ., 2011, In : Proceedings of SPIE- International Society for Optical Engineering. 7962, p. 1-7 7 p.

    Research output: Contribution to journalConference articleScientificpeer-review

  283. Nonrigid registration of dynamic medical imaging data using nD+t B-splines and a groupwise optimization approach

    Metz, C., Klein, S., Schaap, M., van Walsum, T. & Niessen, WJ., 2011, In : Medical Image Analysis. 15, 2, p. 238-249 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  284. Plaque characterization in ex vivo MRI evaluated by dense 3D correspondence with histology

    van Engelen, A., Klein, S., Verhagen, H., Groen, H., Wentzel, JJ., van der Lugt, A., Bruijne, M. D. & Niessen, WJ., 2011, In : Proceedings of SPIE- International Society for Optical Engineering. 7963, p. 1-11 11 p.

    Research output: Contribution to journalConference articleScientificpeer-review

  285. Platelet aggregation inhibitors, vitamin K antagonists and risk of subarachnoid hemorrhage

    Risselada, R., Straatman, H., van Kooten, F., Dippel, DWJ., van der Lugt, A., Niessen, WJ., Firouzian, A., Herings, RMC. & Sturkenboom, MCJM., 2011, In : Journal of Thrombosis and Haemostasis. 9, 3, p. 517-523 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  286. Region based level set segmentation of the outer wall of the carotid bifurcation in CTA

    Vukadinovic, D., van Walsum, T., Manniesing, R., Rozie, S., van der Lugt, A. & Niessen, WJ., 2011, In : Proceedings of SPIE- International Society for Optical Engineering. 7962P, p. 1-4 4 p.

    Research output: Contribution to journalConference articleScientificpeer-review

  287. Replication Study of Chr17q25 With Cerebral White Matter Lesion Volume

    Verhaaren, BFJ., Boer, R., Vernooij, MW., Rivadeneira, F., Uitterlinden, AG., Hofman, A., Krestin, GP., van der Lugt, A., Niessen, WJ., Breteler, MM. & Arfan Ikram, M., 2011, In : Stroke. 42, p. 3297-3299 3 p.

    Research output: Contribution to journalArticleScientificpeer-review

  288. Robust Shape Regression for Supervised Vessel Segmentation and its Application to Coronary Segmentation in CTA

    Schaap, M., van Walsum, T., Neefjes, L., Metz, C., Capuano, E., Bruijne, M. D. & Niessen, WJ., 2011, In : IEEE Transactions on Medical Imaging. 30, 11, p. 1974-1986 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  289. Small coronary calcifications are not detectable by 64-slice contrast enhanced computed tomography

    van der Giessen, AG., Gijsen, FJH., Wentzel, JJ., Jairam, PM., van Walsum, T., Neefjes, L., Mollet, NRA., Niessen, WJ., van de Vosse, FN., Feyter, PJ. & van der Steen, AFW., 2011, In : International Journal of Cardiovascular Imaging. 27, p. 143-152 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  290. Statistical analysis of minimum cost path based structural brain connectivity

    Boer, R. D., Schaap, M., van der Lijn, F., Vrooman, HA., de Groot, M., van der Lugt, A., Arfan Ikram, M., Vernooij, MW., Breteler, MMB. & Niessen, WJ., 2011, In : NeuroImage. 55, p. 557-565 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  291. The Rotterdam Scan Study: design and update up to 2012

    Ikram, MA., van der Lugt, A., Niessen, WJ., Krestin, GP., Koudstaal, PJ., Hofman, A., Breteler, MMB. & Vernooij, M. W., 2011, In : European Journal of Epidemiology. 26, p. 811-824 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  292. 2010
  293. 3D fusion of intravascular ultrasound and coronary computed tomography for in-vivo wall shear stress analysis: a feasibility study

    van der Giessen, AG., Schaap, M., Gijsen, FJH., Groen, HC., van Walsum, T., Mollet, NRA., Dijkstra, J., van de Vosse, FN., Niessen, WJ. & Feyter, PJ., 2010, In : International Journal of Cardiovascular Imaging. 26, 7, p. 781-796 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  294. A 10-year follow-up of hippocampal volume on magnetic resonance imaging in early dementia and cognitive decline

    den Heijer, T., van der Lijn, F., Koudstaal, PJ., Hofman, A., van der Lugt, A., Krestin, GP., Niessen, WJ. & Breteler, MMB., 2010, In : Brain: a journal of neurology. 133, p. 1163-1172 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  295. A Semi-automatic Carotid Artery Bifurcation Segmentation and Bifurcation Angle Quantification on Black Blood MRI

    Tang, H., van Walsum, T., van Onkelen, RS., Hameeteman, R., Schaap, M., Witteman, JCM., van der Lugt, A., van Vliet, LJ. & Niessen, WJ., 2010, In : Lecture Notes in Computer Science. 6363, p. 97-104 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  296. A patient-specific coronary artery density estimate

    Shahzad, R., Schaap, MA., van Walsum, T., Klein, S., Weustink, AC., van Vliet, LJ. & Niessen, WJ., 2010, Proc. 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro. s.n. (ed.). s.n.: s.n., p. 9-12 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  297. Accuracy and reproducibility study of automatic MRI brain tissue segmentation methods

    Boer, R., Vrooman, H., Ikram, MA., Vernooij, MW., Breteler, MMB., van der Lugt, A. & Niessen, WJ., 2010, In : NeuroImage. 51, p. 1047-1056 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  298. Advanced level-set based cell tracking in time-lapse fluorescence microscopy

    Dzyubachyk, O., van Cappellen, WA., Essers, J., Niessen, WJ. & Meijering, E., 2010, In : IEEE Transactions on Medical Imaging. 29, p. 852-867 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  299. Automated analysis of time-lapse fluorescence microscopy images: from live cell images to intracellular foci

    Dzyubachyk, O., Essers, J., van Cappellen, WA., Baldeyron, C., Inagaki, A., Niessen, WJ. & Meijering, E., 2010, In : Bioinformatics. 26, 19, p. 2424-2430 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  300. Brain tissue volumes in relation to cognitive function and risk of dementia

    Ikram, MA., Vrooman, HA., Vernooij, MW., den Heijer, T., Hofman, A., Niessen, WJ., van der Lugt, A., Koudstaal, PJ. & Breteler, MMB., 2010, In : Neurobiology of Aging: age-related phenomena, neurodegeneration and neuropathology. 31, p. 378-386 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  301. Cardiac-Motion Correction for Helical CT

    Isola, AA., van Stevendaal, U., Schaefer, D., Niessen, WJ. & Grass, M., 2010, 2009 IEEE Nuclear Science Symposium Conference Record. s.n. (ed.). s.n., p. 3247-3250 4 p. (IEEE Conference Record - Nuclear Science Symposium & Medical Imaging Conference; vol. 1-5).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  302. Conditional Shape Models for Cardiac Motion Estimation

    Metz, CT., Baka, N., Kirisli, HA., Schaap, MA., van Walsum, T., Klein, S., Neefjes, L., Mollet, NRA., Lelieveldt, BPF., Bruijne, M. & Niessen, WJ., 2010, In : Lecture Notes in Computer Science. 6361, p. 452-459 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  303. Confidence of model based shape reconstruction from sparse data

    Baka, N., Bruijne, M., Reiber, JHC., Niessen, WJ. & Lelieveldt, BPF., 2010, Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro. Meijering et al, E. & Niessen, W. (eds.). Piscataway, NJ, USA: IEEE Society, p. 1077-1080 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  304. Correspondence free 3D statistical shape model fitting to sparse X-ray projections

    Baka, N., Niessen, WJ., Kaptein, BL., van Walsum, T., Ferarrini, L., Reiber, JHC. & Lelieveldt, BPF., 2010, Medical Imaging 2010: Image processing. Haynor, DR. & Dawant, BM. (eds.). Bellingham, WA, USA: SPIE, p. 1-9 9 p. (Proceedings of SPIE- International Society for Optical Engineering; vol. 7623).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  305. Early diagnosis of dementia based on intersubject whole-brain dissimilarities

    Klein, S., Loog, M., van der Lijn, F., den Heijer, T., Hammers, A., Bruijne, M., van der Lugt, A., Duin, RPW., Breteler, MMB. & Niessen, WJ., 2010, Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro. S.N. (ed.). Piscataway, NJ USA: IEEE Society, p. 249-252 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  306. Evaluation of a multi-atlas based method for segmentation of cardiac CTA data: a large-scale, multi-center and multi-vendor study

    Kirisli, HA., Schaap, M., Klein, S., Papadopoulou, SL., Bonardi, ML., Chen, CH., Weustink, AC., Mollet, NRA., Vonken, E. P. A., van der Geest, R. J., van Walsum, T. & Niessen, WJ., 2010, In : Medical Physics. 37, p. 6279-6292 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  307. Fully automatic cardiac segmentation from 3D CTA data: a multiatlas based approach

    Kirisli, HA., Schaap, MA., Klein, S., Neefjes, L., Weustink, AC., van Walsum, T. & Niessen, WJ., 2010, Proc. SPIE. Dawant, BM. & Haynor, DR. (eds.). s.n.: s.n., p. 1-9 9 p. (Proceedings of SPIE- International Society for Optical Engineering; vol. 7623).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  308. Fully automatic nonrigid registration-based local motion estimation for motion-corrected iterative cardiac CT reconstruction

    Isola, AA., Grass, M. & Niessen, WJ., 2010, In : Medical Physics. 37, p. 1093-1109 17 p.

    Research output: Contribution to journalArticleScientificpeer-review

  309. Microtubule dynamics analysis using kymographs and variable-rate particle filters

    Smal, I., Grigoriev, I., Akhmanova, A., Niessen, WJ. & Meijering, E., 2010, In : IEEE Transactions on Image Processing. 19, p. 1861-1876 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  310. Motion compensated iterative reconstruction of a region of interest in cardiac cone-beam CT

    Isola, AA., Ziegler, A., Schafer, A., Kohler, T., Niessen, WJ. & Grass, M., 2010, In : Computerized Medical Imaging and Graphics. 34, p. 149-159 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  311. Particle Filtering Methods for Motion Analysis in Tagged MRI

    Smal, I., Niessen, WJ. & Meijering, E., 2010, 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings. s.n. (ed.). Piscataway: IEEE Society, p. 488-491 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  312. Robust CTA lumen segmentation of the atherosclerotic carotid artery bifurcation in a large patient population

    Manniesing, R., Schaap, M., Rozie, S., Hameeteman, K., Vukadinovic, D., van der Lugt, A. & Niessen, WJ., 2010, In : Medical Image Analysis. 14, 6, p. 759-769 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  313. Segmentation of the outer vessel wall of the common carotid artery in CTA

    Vukadinovic, D., van Walsum, T., Rozie, S., de Weert, TT., Manniesing, R., van der Lugt, A. & Niessen, WJ., 2010, In : IEEE Transactions on Medical Imaging. 29, 1, p. 65-67 3 p.

    Research output: Contribution to journalArticleScientificpeer-review

  314. Three-dimensional registration of histology of human atherosclerotic carotid plaques to in-vivo imaging

    Groen, HC., van Walsum, T., Rozie, S., Klein, S., van Gaalen, K., Gijsen, FJH., Wielopolski, PA., Beusekom, H., de Crom, R., Verhagen, HJM., van der Steen, AFW., van der Lugt, A., Wentzel, JJ. & Niessen, WJ., 2010, In : Journal of Biomechanics. 43, p. 2087-2092 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  315. Vascular Brain Disease and Depression in the Elderly

    Ikram, MA., Luijendijk, HJ., Vernooij, MW., Hofman, A., Niessen, WJ., van der Lugt, A., Tiemeier, H. & Breteler, MMB., 2010, In : Epidemiology. 21, 1, p. 78-81 4 p.

    Research output: Contribution to journalArticleScientificpeer-review

  316. 2009
  317. Accurate estimation of microtubule dynamics using kymographs and variable-rate particle filters

    Smal, I., Grigoriev, I., Akhmanova, A., Niessen, WJ. & Meijering, E., 2009, Annual International Conference of the IEEE Engineering in Medicine and Biology Society - EMBC. s.n. (ed.). s.n., p. 1-4 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  318. Calcification locates to transglutaminases in advanced human atherosclerotic lesions

    Matlung, HL., Groen, HC., de Vos, J., van Walsum, T., van der Lugt, A., Niessen, WJ., Wentzel, JJ., van Bavel, E. & Bakker, ENTP., 2009, In : The American Journal of Pathology: cellular and molecular biology of disease. 175(4), p. 1374-1379 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  319. Carotid artery segmentation and plaque quantification in CTA

    Vukadinovic, D., van Walsum, T., Rozie, S., de Weert, TT., Manniesing, R., van der Lugt, A. & Niessen, WJ., 2009, IEEE International Symposium on Biomedical Imaging 1+2. s.n. (ed.). IEEE Society, p. 835-838 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  320. Cerebellum segmentation in MRI using atlas registration and local multi-scale image descriptors

    van der Lijn, F., Bruijne, M., Hoogendam, YY., Klein, S., Hameeteman, K., Breteler, MMB. & Niessen, WJ., 2009, Proceedings of IEEE International Symposium on Biomedical Imaging: Macro to Nano. s.n. (ed.). s.n., p. 221-224 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  321. Cerebral microbleeds differ in etiology according to their location in the brain

    Vernooij, M. W., van der Lugt, A., Ikram, MA., Wielopolski, PA., Niessen, WJ., Hofman, A., Krestin, GP. & Breteler, MMB., 2009, In : Neurology. 24, 72(8), p. 763-765 3 p.

    Research output: Contribution to journalArticleScientificpeer-review

  322. Conory lumen segmentation using graph cuts and robust kernel regression

    Schaap, M., Neefjes, L., Metz, CT., van der Giessen, AG., Weustink, AC., Mollet, NRA., Wentzel, JJ., van Walsum, T. & Niessen, WJ., 2009, In : Lecture Notes in Computer Science. 5636, p. 528-539 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  323. Coronary centerline extraction form CT coronary angiography images using a minimum cost path approach

    Metz, CT., Schaap, M., Weustink, AC., Mollet, NRA., van Walsum, T. & Niessen, WJ., 2009, In : Medical Physics. 36, 12, p. 5568-5579 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  324. Efficient projection model for blobs in motion-compensated iterative cone-beam CT

    Isola, AA., Ziegler, A., Kohler, T. & Niessen, WJ., 2009, IEEE Nuclear Science Symposium / Medical Imaging Conference. s.n. (ed.). s.n., p. 3405-3412 8 p. (IEEE Nuclear Science Symposium - Conference Record; vol. 1-9).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  325. Energy minimazation methods for cell motion correction and intracellular analysis in live-cell fluorescence microscopy

    Dzyubachyk, O., van Cappellen, WA., Essers, J., Niessen, WJ. & Meijering, E., 2009, IEEE International Symposium on Biomedical Imaging: From Nano to Macro - ISBI. s.n. (ed.). s.n., p. 1127-1130 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  326. GPU accelerated alignment of 3-D CTA with 2-D X-ray data for improved guidance in coronary interventions

    Metz, CT., Schaap, M., Klein, S., Weustink, AC., Mollet, NRA., Schulz, C., Geuns, RJ., Serruys, PW. & Niessen, WJ., 2009, Proceedings of IEEE International Symposium on Biomedical Imaging: Macro to Nano, 2009. s.n. (ed.). s.n., p. 959-962 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  327. Integrating biological knowledge, novel imaging modalities, and modeling in breast cancer diagnosis

    Karssemeijer, N., Huisman, H., Hawkes, D., Hipwell, J., Bohler, T., Lesniak, J., Tanner, C., Szekely, G., Niessen, WJ. & Hahn, H., 2009, 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro. s.n. (ed.). s.n., p. 386-389 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  328. Iterative co-linearity filtering and parameterization of fiber tracts in the entire cingulum

    de Groot, M., Vernooij, M. W., Klein, S., Leemans, A., Boer, R., van der Lugt, A., Breteler, MMB. & Niessen, WJ., 2009, In : Lecture Notes in Computer Science. 5761, p. 853-860 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  329. Model-based approach for tracking embryogenesis in caenorhabditis elegans fluorescence microscopy data

    Dzyubachyk, O., Jelier, R., Lehner, B., Niessen, WJ. & Meijering, E., 2009, Annual International Conference of the IEEE Engineering in Medicine and Biology Society - EMBC. s.n. (ed.). s.n., p. 1-4 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  330. On the evaluation of coronary artery centerline extraction algorithms - A standardized methodology and reference database

    Schaap, M., Metz, CT., van Walsum, T., van der Giessen, AG., Weustink, AC., Mollet, NRA., Krestin, GP. & Niessen, WJ., 2009, IFMBE Proceedings. World Congress on Medical Physics and Biomedical Engineering. s.n. (ed.). Munchen: s.n., p. 1897-1900 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  331. Patient specific 4D coronary models from ECG-gated CTA data for intra-operative dynamic alignment of CTA with X-ray images

    Metz, CT., Schaap, M., Klein, S., Neefjes, L., Capuano, E., Schultz, C., van Geuns, L., Serruys, PW., van Walsum, T. & Niessen, WJ., 2009, In : Lecture Notes in Computer Science. p. 369-376 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  332. Postmenopausal hormone therapy and regional brain volumes: the whims-MRI study

    den Heijer, T., van der Lijn, F., Niessen, WJ. & Breteler, MM., 2009, In : Neurology. 73(18), p. 1514-1514 1 p.

    Research output: Contribution to journalArticleScientificpeer-review

  333. Quantitative comparison of spot detection methods in live-cell fluorescence microscopy imaging

    Smal, I., Loog, M., Niessen, WJ. & Meijering, E., 2009, IEEE International Symposium on Biomedical Imaging: From Nano to Macro - ISBI 2009. s.n. (ed.). s.n., p. 1178-1181 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  334. Selective deblurring for improved calcificaton visualization and quantification in carotid CT angiografphy: validation using micro-CT

    Rollano-Hijarrubia, E., Manniesing, R. & Niessen, WJ., 2009, In : IEEE Transactions on Medical Imaging. 28(3), p. 446-453 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  335. Standardized evaluation metholology and reference database for evaluating coronary artery centerline extraction algorithms

    Schaap, M., Metz, CT., van Walsum, T., van der Giessen, AG., Weustink, AC., Mollet, NRA., Bauer, C., Bogunovic, H., de Castro, C., Deng, X., Dikici, E., O'Donnel, T., Frenay, M., Friman, O., Hernández Hoyos, M., Kitslaar, P. H., Krissian, K., Kühnel, C., Luengo-Oroz, MA., Orkisz, M. & 10 othersSmedby, Ö., Styner, M., Szymczak, A., Tek, H., Wang, H., Warfield, S. K., Zambal, S., Zhang, Y., Krestin, GP. & Niessen, WJ., 2009, In : Medical Image Analysis. 13(5), p. 701-714 14 p.

    Research output: Contribution to journalArticleScientificpeer-review

  336. White matter lesion extension to automatic brain tissue segmentation on MRI

    Boer, R., Vrooman, HA., van der Lijn, F., Vernooij, M. W., Ikram, MA., van der Lugt, A., Breteler, MM. & Niessen, WJ., 2009, In : NeuroImage. 1;45(4), p. 1151-1161 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  337. White matter microstructural integrity and coginitive function in a general elderly population

    Vernooij, M. W., Ikram, MA., Vrooman, HA., Wielopolski, PA., Krestin, GP., Hofman, A., Niessen, WJ., van der Lugt, A. & Breteler, MM., 2009, In : Archives of General Psychiatry. 66(5), p. 545-553 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  338. Withdrawal of statins and risk of subarachnoid haemorrhage

    Risselada, R., Straatman, H., van Kooten, F., Dippel, DWJ., van der Lugt, A., Niessen, WJ., Firouzian, A., Herings, RMC. & Sturkenboom, MCJM., 2009, In : Stroke. 40(8), p. 2887-2892 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  339. 2008
  340. 3D Segmentation in the clinic: a grand challenge II - coronary artery tracking

    Metz, CT., Schaap, M., van Walsum, T., van der Giessen, AG., Weustink, AC., Mollet, NRA., Krestin, GP. & Niessen, WJ., 2008, Proceedings of the MICCAI 2008 workshop. Cattin, P., Feuerstein, M. & et al (eds.). nn, p. 2-7 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  341. Fast noise reduction in computed tomography for improved 3-D visualization

    Schaap, M., Schilham, AM., Zuiderveld, KJ., Prokop, M., Vonken, EJ. & Niessen, WJ., 2008, In : IEEE Transactions on Medical Imaging. 27, 8, p. 1120-1129 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  342. Hippocampus segmentation in MR images using atlas registration, voxel classification, and graph cuts

    van der Lijn, F., den Heijer, T., Breteler, MMB. & Niessen, WJ., 2008, In : NeuroImage. 43, 4, p. 708-720 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  343. Motion compensated literative reconstruction of a cardiac region of interest for CT

    Isola, AA., Ziegler, A., Köhler, T., van Stevendaal, U., Schäfer, D., Niessen, WJ. & Grass, M., 2008, ECIFBME Proceedings 22. nn (ed.). EMBEC, p. 646-650 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  344. Motion-compensated iterative cone-beam CT image reconstruction with adapted blobs as basis functions

    Isola, AA., Ziegler, A., Koehler, T., Niessen, WJ. & Grass, M., 2008, In : Physics in Medicine and Biology. 7, 53(23), p. 6777-6797 21 p.

    Research output: Contribution to journalArticleScientificpeer-review

  345. Prevalence and risk factors of cerebral microbleeds: The Rotterdam Scan Study

    Vernooij, M. W., van der Lugt, A., Ikram, MA., Wielopolski, PA., Niessen, WJ., Hofman, A., Krestin, GP. & Breteler, MMB., 2008, In : Neurology. 70, p. 1208-1214 7 p.

    Research output: Contribution to journalArticleScientificpeer-review

  346. Segmentation for image guided interventions

    Niessen, WJ., 2008, Image Guided Surgery. Peters, T. & Cleary, K. (eds.). Springer Verlag, p. 219-241 500 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

  347. Two point minimum cost path approach for CTA coronary centerline extraction, 3D segmentation in the clinic: a grand challenge II

    Metz, CT., Schaap, M., van Walsum, T. & Niessen, WJ., 2008, Proceedings MICCAI 2008 workshop. nn (ed.). New York: MICCAI, p. 1-8 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  348. Volume preserving image registration via a post-processing stage

    Hameeteman, K., Veenland, JF. & Niessen, WJ., 2008, In : Proceedings of SPIE- International Society for Optical Engineering. 6914, p. 1-10 10 p.

    Research output: Contribution to journalConference articleScientificpeer-review

  349. White matter atrophy and lesion formation explain the loss of structural integrity of white matter in aging

    Vernooij, M. W., de Groot, M., van der Lugt, A., Ikram, MA., Krestin, GP., Hofman, A., Niessen, WJ. & Breteler, MM., 2008, In : NeuroImage. 15, 43(3), p. 470-477 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  350. 2007
  351. 3D X-ray image guidance in interventional radiology

    Niessen, WJ., van de Kraats, E. B., Baert, S. A. M. & van Walsum, T., 2007, Proc. 4th IEEE Int. Symposium on Biomedical Imaging: From Nano tot Macro. s.n. (ed.). IEEE Society, p. 1000-1003 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  352. A Variational model for level-set based cell tracking in time-lapse fluorescence microscopy images

    Dzyubachyk, O., Niessen, WJ. & Meijering, E., 2007, Proc. 4th IEEE Int. Symposium on Biomedical Imaging: From Nano tot Macro. s.n. (ed.). IEEE Society, p. 97-100 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  353. Advanced Particle Filtering for Multiple Object Tracking in Dynamic Fluorescence Microscopy Images

    Smal, I., Niessen, WJ. & Meijering, E., 2007, IEEE International Symposium on Biomedical Imaging: From Nano to Macro. s.n. (ed.). s.n.: IEEE Society, p. 1048-1051 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  354. Automactic segmentation of brain tissue and white matter lesions in MRI

    Boer, R., van der Lijn, F., Vrooman, HA., Vernooij, M. W., Ikram, MA., Breteler, MMB. & Niessen, WJ., 2007, 4th IEEE Int. Symposium on Biomedical Imaging: From Nano to Macro. s.n. (ed.). IEEE Society, p. 652-655 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  355. Automated localication of periventricular and subcortical white matter lesions

    van der Lijn, F., Vernooij, M. W., Arfan Ikram, M., Vrooman, HA., Rueckert, D., Hammers, A., Breteler, MMB. & Niessen, WJ., 2007, In : Proceedings of SPIE- International Society for Optical Engineering. 6512

    Research output: Contribution to journalConference articleScientificpeer-review

  356. Automatic segmentations of arteries through the skull base

    Manniesing, R. & Niessen, WJ., 2007, In : Proceedings of SPIE- International Society for Optical Engineering. 6512

    Research output: Contribution to journalConference articleScientificpeer-review

  357. Bayesian tracking of tubular structures and its application to carotid arteries in CTA

    Schaap, M., Manniesing, R., Smal, I., van Walsum, T., van der Lugt, A. & Niessen, WJ., 2007, In : Lecture Notes in Computer Science. p. 562-570 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  358. Combining graph cuts, atlas registration, and voxel classification for hippocampus segmentation in MR images

    van der Lijn, F., den Heijer, T., Breteler, MMB. & Niessen, WJ., 2007, Mathematical methods in biomedical image analysis- IN PRESS. Nielsen, M., Niessen, WJ. & Westin, CF. (eds.). IEEE Society, p. 1-5 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  359. Histogram-based selective deblurring to improve CT imaging of calcifications

    Rollano-Hijarrubia, E., Niessen, WJ., Weinans, H., van der Lugt, A. & Stokking, R., 2007, In : Investigative Radiology: a journal of clinical and laboratory research. 42, 1, p. 8-22 15 p.

    Research output: Contribution to journalArticleScientificpeer-review

  360. Image-guided vascular neurosurgery based on three-dimensional rotational angiography - Technical note

    Willems, PWA., van Walsum, T., Woerdeman, PA., van de Kraats, E. B., de Kort, GAP., Niessen, WJ. & van der Sprenkel, JWB., 2007, In : Journal of Neurosurgery. 106, 3, p. 510-506 3 p.

    Research output: Contribution to journalArticleScientificpeer-review

  361. Incidental findings on brain MRI in the general population

    Vernooij, M. W., Ikram, MA., Tanghe, HL., Vincent, AJPE., Hofman, A., Krestin, GP., Niessen, WJ., Breteler, MMB. & van der Lugt, A., 2007, In : New England Journal of Medicine. 357, 18, p. 1821-1828 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  362. Modeling friction, intrinsic curvature, and rotation of guide wires for simulation of minimally invasive vascular interventions

    Alderliesten, T., Konings, MK. & Niessen, WJ., 2007, In : IEEE Transactions on Biomedical Engineering. 54, 1, p. 29-38 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  363. Multi-spectral brain tissue segmentation using automatically trained k-Nearest-Neighbor classification

    Vrooman, HA., Cocosco, C. A., van der Lijn, F., Stokking, R., Ikram, MA., Vernooij, M. W., Breteler, MMB. & Niessen, WJ., 2007, In : NeuroImage. 37, 1, p. 71-81 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  364. Rao-blackwellizezd marginal particle filtering for multiple object tracking in molecular bioimaging

    Smal, I., Draegestein, K., Galjart, N., Niessen, WJ. & Meijering, E., 2007, In : Lecture Notes in Computer Science. p. 110-121 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  365. Semi-automatic coronary artery centerline extraction in computed tomography angiography data

    Metz, C., Schaap, M., van der Giessen, A., van Walsum, T. & Niessen, WJ., 2007, Proc. 4th IEEE Int. Symposium on Biomedical Imaging: From Nano to Macro. s.n. (ed.). IEEE Society, p. 856-859 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  366. Towards a real-time minimally-invasive vascular intervention simulation system

    Alderliesten, T., Bosman, PAN. & Niessen, WJ., 2007, In : IEEE Transactions on Medical Imaging. 26, 1, p. 128-132 5 p.

    Research output: Contribution to journalArticleScientificpeer-review

  367. Vessel Axis Tracking Using Topology constrained Surface Evolution

    Manniesing, R., Viergever, MA. & Niessen, WJ., 2007, In : IEEE Transactions on Medical Imaging. 26, 3, p. 309-316 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  368. 2006
  369. Accuracy Comparison of a 16 and 64 MDCT Scanner to Image Small High-density Structures

    Rollano-Hijarrubia, E., Stokking, R. & Niessen, WJ., 2006, In : Investigative Radiology: a journal of clinical and laboratory research. 41, 11, p. 781-792 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  370. Bayesian Tracking for Fluorescence Microscopic Imaging

    Smal, I., Niessen, WJ. & Meijering, E., 2006, From Nano to Macro. Christensen, G., Coatrieux, JL., Fessler, J., Kovacevic, J., Liang, ZP., Meijering, E., Moura, J., Murphy, B., Niessen, W., Roux, C., Unser, M. & Wilson, D. (eds.). Piscataway: IEEE Society, p. 550-553 4 p. (International Symposium on Biomedical Imaging. Proceedings; vol. 4).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  371. Imaging of Small High-Density Structures in CT: A Phantom Study

    Rollano-Hijarrubia, E., Stokking, R., van der Meer, F. & Niessen, WJ., 2006, In : Academic Radiology. 13, 7, p. 893-908 16 p.

    Research output: Contribution to journalArticleScientificpeer-review

  372. Level Set Based Cerebral Vasculature Segmentation and Diameter Quantification in CT Angiography

    Manniesing, R., Velthuis, BK., Leeuwen, MS., van der Schaaf, IC., van Laar, PJ. & Niessen, WJ., 2006, In : Medical Image Analysis. 10, 2, p. 200-214 15 p.

    Research output: Contribution to journalArticleScientificpeer-review

  373. Navigation With Three-Dimensional Rotational X-Ray Data for Transpedicular Percutaneous Needle Introduction: Feasibility and Comparison with Fluoroscopic Guidance

    van Walsum, T., van de Kraats, E. B., Voormolen, MHJ., Verlaan, J-J., Mali, WPT. & Niessen, WJ., 2006, In : Journal of Vascular and Interventional Radiology. 17, 9, p. 1511-1518 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  374. Quantification of Heterogeneity in Dynamic Contrast Enhanced MRI Data for Tumor Treatment Assessment

    Alic, L., Veenland, J., van Vliet, M., Dijke, CF., Eggermont, AMM. & Niessen, WJ., 2006, From Nano to Macro. Christensen, G., Coatrieux, JL., Fessler, J., Kovacevic, J., Liang, ZP., Meijering, E., Moura, J., Murphy, B., Niessen, WJ., Roux, C., Unser, M. & Wilson, D. (eds.). Piscataway: IEEE Society, p. 944-947 4 p. (International Symposium on Biomedical Imaging. Proceedings; vol. 4).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  375. Quantitative evaluation of three calibration methods for 3-D freehand ultrasound

    Rousseau, F., Hellier, P., Letteboer, MM., Niessen, WJ. & Barillot, C., 2006, In : IEEE Transactions on Medical Imaging. 25, 11, p. 1492-1501 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  376. Robustness and complexity of a minimally invasive vascular intervention simulation system

    Alderliesten, T., Konings, MK. & Niessen, WJ., 2006, In : Medical Physics. 33, 12, p. 4758-4769 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  377. Shape Constrained Vessel Centerline Extraction by Integrating Surface Evolution and Topology Analysis

    Manniesing, R. & Niessen, WJ., 2006, From Nano to Macro. Christensen, G., Coatrieux, JL., Fessler, J., Kovacevic, J., Liang, ZP., Meijering, E., Moura, J., Murphy, B., Niessen, W., Roux, C., Unser, M. & Wilson, D. (eds.). Piscataway: IEEE Society, p. 165-168 4 p. (International Symposium on Biomedical Imaging. Proceedings; vol. 4).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  378. Three-Dimensional Rotational X-Ray Navigation for Needle Guidance in Percutaneous Vertebroplasty: An Accuracy Study

    van de Kraats, E. B., van Walsum, T., Verlaan, J-J., Voormolen, MHJ., Mali, WPT. & Niessen, WJ., 2006, In : Spine (Philadelphia, 1976). 31, 12, p. 1359-1364 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  379. Vascular image analysis: From vessel enhancement to intravascular invterventions

    Niessen, WJ., 2006, ASCI 2006: Proceedings of the 12th annual conference of the Advanced School for Computing and Imaging. Lelieveldt, B., Haverkort, B., de Laat, C. T. A. M. & Heijnsdijk, J. W. J. (eds.). Delft: ASCI, p. 8-8 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  380. Vessel Enhancing Diffusion: A Scale Space Representation of Vessel Structures

    Manniesing, R., Viergever, MA. & Niessen, WJ., 2006, In : Medical Image Analysis. 10, 6, p. 815-825 11 p.

    Research output: Contribution to journalArticleScientificpeer-review

  381. kNN-Based Multi-Spectral MRI Brain Tissue Classification: Manual Training versus Automatic Atlas-based Training

    Vrooman, HA., Cocosco, C. A., Stokking, R., Ikram, MA., Vernooij, MW., Breteler, MM. & Niessen, WJ., 2006, In : Proceedings of SPIE- International Society for Optical Engineering. 6144, p. 944-947 4 p.

    Research output: Contribution to journalConference articleScientificpeer-review

  382. kNN-based Multi-Spectral MRI Brain Tissue Classification: Manual Training versus Automated Atlas-based Training

    Vrooman, HA., Cocosco, C. A., Stokking, R., Ikram, MA., Vernooij, MW., Breteler, MM. & Niessen, WJ., 2006, ASCI 2006: Proceedings of the 12th annual conference of the Advanced School for Computing and Imaging. Lelieveldt, B. P. F., Haverkort, B., de Laat, C. T. A. M. & Heijnsdijk, J. W. J. (eds.). Delft: ASCI, p. 440-447 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

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