Noise-adaptive attenuation coefficient estimation in spectral domain optical coherence tomography data

Babak Ghafaryasl, Koenraad A. Vermeer, Johannes F. de Boer, Mirjam E.J. van Velthoven, Lucas J van Vliet

    Research output: Chapter in Book/Conference proceedings/Edited volumeConference contributionScientificpeer-review

    5 Citations (Scopus)

    Abstract

    The attenuation coefficient (AC) is a tissue property that can be estimated from optical coherence tomography (OCT) data. We observed that excessive noise below the retina might cause both an underestimation and a significant variation of the estimated AC values by a state-of-the-art algorithm. Two methods were proposed to reduce these effects: I) by removing the average noise signal from the OCT data; II) by excluding the detected noise region below the retina. The methods were applied to four circular peripapillary retinal scans of a healthy subject. We evaluated all methods quantitatively using metrics for the inter- and intra-A-lines variation of the estimated ACs. Both methods resulted in higher ACs thereby reducing the bias. However, only method II succeeded in reducing the amount of variation by both metrics; method I made things worse. In conclusion, method II yields a more robust and more precise estimate of the AC, in particular for the choroid and sclera, compared to the baseline method.
    Original languageEnglish
    Title of host publication2016 IEEE International Symposium on Biomedical Imaging: From Nano to Macro
    PublisherIEEE
    Pages706-709
    Number of pages4
    ISBN (Print)978-1-4799-2350-2
    DOIs
    Publication statusPublished - 2016
    Event2016 IEEE 13th International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2016 - Prague, Czech Republic
    Duration: 13 Apr 201616 Apr 2016

    Conference

    Conference2016 IEEE 13th International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2016
    Country/TerritoryCzech Republic
    CityPrague
    Period13/04/1616/04/16

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