1. 2020
  2. Eleven grand challenges in single-cell data science

    Lähnemann, D., Köster, J., Robinson, M. D., Vallejos, C. A., Campbell, K. R., Beerenwinkel, N., Pinello, L., Lelieveldt, B. P. F., Reinders, M. & More Authors, 7 Feb 2020, In : Genome biology. 21, 1, 1 p., 31.

    Research output: Contribution to journalReview articleScientificpeer-review

  3. Facial feedback for reinforcement learning: a case study and offline analysis using the TAMER framework

    Li, G., Dibeklioğlu, H., Whiteson, S. & Hung, H., 2020, In : Autonomous Agents and Multi-Agent Systems. 34, 1, 29 p., 22.

    Research output: Contribution to journalArticleScientificpeer-review

  4. GPGPU Linear Complexity t-SNE Optimization

    Pezzotti, N., Thijssen, J., Mordvinstev, A., Hollt, T., Van Lew, B., Lelieveldt, B., Eisemann, E. & Vilanova, A., 2020, In : IEEE Transactions on Visualization and Computer Graphics. 26, 1, p. 1172-1181 10 p., 8811606.

    Research output: Contribution to journalArticleScientificpeer-review

  5. Gestures In-The-Wild: Detecting Conversational Hand Gestures in Crowded Scenes Using a Multimodal Fusion of Bags of Video Trajectories and Body Worn Acceleration

    Cabrera Quiros, L., Tax, D. M. J. & Hung, H., 2020, In : IEEE Transactions on Multimedia. 22, 1, p. 138-147 10 p., 8734888.

    Research output: Contribution to journalArticleScientificpeer-review

  6. Helminth infections drive heterogeneity in human type 2 and regulatory cells

    de Ruiter, K., Jochems, S. P., Tahapary, D. L., Stam, K. A., König, M., van Unen, V., Höllt, T., Mbow, M., Lelieveldt, B. P. F. & More Authors, 2020, In : Science Translational Medicine. 12, 524, 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  7. On Social Involvement in Mingling Scenarios: Detecting Associates of F-formations in Still Images

    Zhang, L. & Hung, H., 2020, (Accepted/In press) In : IEEE Transactions on Affective Computing. p. 1-13 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  8. 2019
  9. Message from the technical program chairs and the program coordinator

    Gravier, G., Hung, H., Ngo, C. W., Ooi, W. T. & Chua, T. S., 15 Oct 2019, In : MM 2019 - Proceedings of the 27th ACM International Conference on Multimedia. p. vi-vii

    Research output: Contribution to journalEditorialScientific

  10. Multimodal data collection for social interaction analysis in-the-wild

    Hung, H., Raman, C., Gedik, E., Tan, S. & Quiros, J. V., 15 Oct 2019, MM 2019 - Proceedings of the 27th ACM International Conference on Multimedia. Association for Computing Machinery (ACM), p. 2714-2715 2 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  11. Panel: Challenges for multimedia/multimodal research in the next decade

    Chang, S. F., Morency, L. P., Hauptmann, A., Bimbo, A. D., Ji, H., Gurrin, C., Smeaton, A. & Hung, H., 15 Oct 2019, MM 2019 - Proceedings of the 27th ACM International Conference on Multimedia. Association for Computing Machinery (ACM), p. 2234-2235 2 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  12. Running event visualization using videos from multiple cameras

    Napolean, Y., Wibowo, P. T. & Van Gemert, J. C., 15 Oct 2019, MMSports 2019 - Proceedings of the 2nd International Workshop on Multimedia Content Analysis in Sports, co-located with MM 2019. New York: Association for Computing Machinery (ACM), p. 82-90 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  13. Creating a 4D Street View of Amsterdam from Historical Images

    Siebes, R., Khademi, S., Mager, T., Hein, C., de Boer, V. & van Gemert, J., 10 Oct 2019, (Accepted/In press).

    Research output: Contribution to conferencePosterScientific

  14. Multi-scale convolutional neural network for pixel-wise reconstruction of Van Gogh’s drawings

    Zeng, Y., van der Lubbe, J. C. A. & Loog, M., 1 Oct 2019, In : Machine Vision and Applications. 30, 7-8, p. 1229-1241 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  15. Context in Human Emotion Perception for Automatic Affect Detection: A Survey of Audiovisual Databases

    Dudzik, B., Jansen, M. P., Burger, F., Kaptein, F., Broekens, J., Heylen, D. K. J., Hung, H., Neerincx, M. A. & Truong, K. P., 1 Sep 2019, 2019 8th International Conference on Affective Computing and Intelligent Interaction, ACII 2019. Institute of Electrical and Electronics Engineers (IEEE), 7 p. 8925446

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  16. Estimating Romantic, Social, and Sexual Attraction by Quantifying Bodily Coordination using Wearable Sensors

    Kapcak, O., Vargas-Quiros, J. & Hung, H., 1 Sep 2019, 2019 8th International Conference on Affective Computing and Intelligent Interaction Workshops and Demos, ACIIW 2019. Institute of Electrical and Electronics Engineers (IEEE), p. 154-160 7 p. 8925137

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  17. A Hierarchical Approach for Associating Body-Worn Sensors to Video Regions in Crowded Mingling Scenarios

    Cabrera Quiros, L. & Hung, H., 2019, In : IEEE Transactions on Multimedia. 21, 7, p. 1867-1879 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  18. A data-driven interactome of synergistic genes improves network-based cancer outcome prediction

    Allahyar, A., Ubels, J. & de Ridder, J., 2019, In : PLoS Computational Biology. 15, 2, p. 1-21 21 p., e1006657.

    Research output: Contribution to journalArticleScientificpeer-review

  19. A dissimilarity-based multiple instance learning approach for protein remote homology detection

    Mensi, A., Bicego, M., Lovato, P., Loog, M. & Tax, D. M. J., 2019, In : Pattern Recognition Letters. 128, p. 231-236 6 p.

    Research output: Contribution to journalArticleScientificpeer-review

  20. An Efficient Preconditioner for Stochastic Gradient Descent Optimization of Image Registration

    Qiao, Y., Lelieveldt, B. P. F. & Staring, M., 2019, In : IEEE Transactions on Medical Imaging. 38, 10, p. 2314-2325 12 p., 8638803.

    Research output: Contribution to journalArticleScientificpeer-review

  21. Automatic quantification of bone marrow edema on MRI of the wrist in patients with early arthritis: A feasibility study (vol 79, pg 1127, 2018): Automatic quantification of bone marrow edema on MRI of the wrist in patients with early arthritis: A feasibility study (Magn Reson Med. 2018; 79:1127‐1134)

    Aizenberg, E., Roex, E. A. H., Nieuwenhuis, W. P., Mangnus, L., van der Helm-van Mil, A. H. M., Reijnierse, M., Bloem, J. L., Lelieveldt, B. P. F. & Stoel, B. C., 2019, In : Magnetic Resonance in Medicine. 82, 1, p. 510-510 1 p.

    Research output: Contribution to journalComment/Letter to the editorScientific

  22. Comparative Analysis of Magnetic Resonance Fingerprinting Dictionaries via Dimensionality Reduction

    Dzyubachyk, O., Koolstra, K., Pezzotti, N., Lelieveldt, B., Webb, A. & Börnert, P., 2019, Graph Learning in Medical Imaging : 1st International Workshop, GLMI 2019, held in Conjunction with MICCAI 2019, Proceedings. Zhang, D., Zhou, L., Jie, B. & Liu, M. (eds.). Cham: Springer, p. 44-52 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11849 ).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  23. Complex conversational scene analysis using wearable sensors

    Hung, H., Gedik, E. & Cabrera Quiros, L., 2019, Multimodal Behavior Analysis in the Wild: Advances and Challenges. Alameda-Pineda, X., Ricci, E. & Sebe, N. (eds.). London: Academic Press, p. 225-245 22 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterScientific

  24. Conserved cell types with divergent features in human versus mouse cortex

    Hodge, R. D., Bakken, T. E., Miller, J. A., Smith, K. A., Barkan, E. R., Graybuck, L. T., Close, J. L., Hollt, T., Mahfouz, A., Lelieveldt, B. & More Authors, 2019, In : Nature. 573, p. 61-68 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  25. Cross Domain Image Matching in Presence of Outliers

    Liu, X., Khademi, S. & van Gemert, J. C., 2019, (Accepted/In press) CCV workshop on Transferring and Adapting Source Knowledge in Computer Vision. p. 1-7 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  26. CyTOFmerge: integrating mass cytometry data across multiple panels

    Abdelaal, T., Hollt, T., van Unen, V., Lelieveldt, B. P. F., Koning, F., Reinders, M. & Mahfouz, A., 2019, In : Bioinformatics. 35, 20, p. 4063-4071 9 p.

    Research output: Contribution to journalArticleScientificpeer-review

  27. Cytosplore: Interactive Visual Single-Cell Profiling of the Immune System

    Hollt, T., Pezzotti, N., van Unen, V., Koning, F., Eisemann, E., Lelieveldt, B. & Vilanova, A., 2019, Eurographics 2019 : Dirk Bartz Prize. Bruckner, S. & Steffen, O. J. (eds.). The Eurographics Association, p. 1-4 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  28. Deep Visual City Recognition Visualization

    Shi, X., Khademi, S. & van Gemert, J., 2019, (Accepted/In press) CVPR workshop on Explainable AI. p. 1-6 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  29. Detecting F-formations Roles in Crowded Social Scenes with Wearables: Combining Proxemics Dynamics using LSTMs

    Rosatelli, A., Gedik, E. & Hung, H., 2019, 2019 8th International Conference on Affective Computing and Intelligent Interaction Workshops and Demos (ACIIW). IEEE, p. 147-153 7 p. 8925179

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  30. Divide and Count: Generic Object Counting by Image Divisions

    Stahl, T., Pintea, S. L. & Van Gemert, J. C., 2019, In : IEEE Transactions on Image Processing. 28, 2, p. 1035-1044 10 p., 8488575.

    Research output: Contribution to journalArticleScientificpeer-review

  31. Early-life compartmentalization of immune cells in human fetal tissues revealed by high-dimensional mass cytometry

    Li, N., van Unen, V., Guo, N., Abdelaal, T., Somarakis, A., Eggermont, J., Mahfouz, A., Chuva de Sousa Lopes, S. M., Lelieveldt, B. P. F. & Koning, F., 2019, In : Frontiers in Immunology. 10, p. 1-13 13 p., 1932.

    Research output: Contribution to journalArticleScientificpeer-review

  32. Efficient Real-Time Camera Based Estimation of Heart Rate and Its Variability

    Gudi, A., Bittner, M., Lochmans, R. & van Gemert, J., 2019, (Accepted/In press) International Conference on Computer Vision (ICCV) Workshop on Computer Vision for Physiological Measurement (CVPM).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  33. Evaluation of an Open Source Registration Package for Automatic Contour Propagation in Online Adaptive Intensity-Modulated Proton Therapy of Prostate Cancer

    Qiao, Y., Jagt, T., Hoogeman, M., Lelieveldt, B. & Staring, M., 2019, In : Frontiers in Oncology. 9, p. 1-13 13 p., 1297.

    Research output: Contribution to journalArticleScientificpeer-review

  34. Fast Dynamic Perfusion and Angiography Reconstruction Using an End-to-End 3D Convolutional Neural Network

    Yousefi, S., Hirschler, L., van der Plas, M., Elmahdy, M. S., Sokooti, H., van Osch, M. J. P. & Staring, M., 2019, Machine Learning for Medical Image Reconstruction : 2nd International Workshop, MLMIR 2019, held in Conjunction with MICCAI 2019, Proceedings. Knoll, F., Maier, A., Rueckert, D. & Ye, J. C. (eds.). Cham: Springer, p. 25-35 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11905 ).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  35. Gaussian process variance reduction by location selection

    Bottarelli, L. & Loog, M., 2019, In : Pattern Recognition Letters. 125, p. 727-734 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  36. Hand-tremor frequency estimation in videos

    Pintea, S. L., Zheng, J., Li, X., Bank, P. J. M., van Hilten, J. J. & van Gemert, J. C., 2019, Computer Vision : ECCV 2018 Workshops, Proceedings. Leal-Taixé, L. & Roth, S. (eds.). Part VI ed. Cham: Springer, p. 213-228 16 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11134 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  37. High-dimensional cytometric analysis of colorectal cancer reveals novel mediators of antitumour immunity

    De Vries, N. L., Van Unen, V., Ijsselsteijn, M. E., Abdelaal, T., Van Der Breggen, R., Farina Sarasqueta, A., Mahfouz, A., Peeters, K. C. M. J., Höllt, T., Lelieveldt, B. P. F., Koning, F. & De Miranda, N. F. C. C., 2019, In : Gut. p. 1-13 13 p.

    Research output: Contribution to journalArticleScientificpeer-review

  38. Learning an MR acquisition-invariant representation using Siamese neural networks

    Kouw, W. M., Loog, M., Bartels, L. W. & Mendrik, A. M., 2019, 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019) : Proceedings. Danvers: IEEE, p. 364-367 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  39. Memory CD4+ T cells are generated in the human fetal intestine

    Li, N., van Unen, V., Abdelaal, T., Guo, N., Kasatskaya, S. A., Chuva de Sousa Lopes, S. M., Höllt, T., Britanova, O. V., Lelieveldt, B. P. F. & More Authors, 2019, In : Nature Immunology. 20, 3, p. 301-312 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  40. On the Statistical Detection of Adversarial Instances over Encrypted Data

    Sheikhalishahi, M., Nateghizad, M., Martinelli, F., Erkin, Z. & Loog, M., 2019, Security and Trust Management - 15th International Workshop, STM 2019, Proceedings. Mauw, S. & Conti, M. (eds.). Springer, p. 71-88 18 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11738 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  41. PRECISE: A domain adaptation approach to transfer predictors of drug response from pre-clinical models to tumors

    Mourragui, S., Loog, M., van der Wiel, M. A., Reinders, M. & Wessels, L., 2019, In : Bioinformatics. 35, 14, p. i510-i519 10 p., btz372.

    Research output: Contribution to journalArticleScientificpeer-review

  42. Quantification of aortic pulse wave velocity from a population based cohort: A fully automatic method

    Shahzad, R., Shankar, A., Amier, R., Nijveldt, R., Westenberg, J. J. M., de Roos, A., Lelieveldt, B. P. F. & van Der Geest, R. J., 2019, In : Journal of Cardiovascular Magnetic Resonance. 21, 1, p. 1-14 14 p., 27.

    Research output: Contribution to journalArticleScientificpeer-review

  43. Quantitative error prediction of medical image registration using regression forests

    Sokooti, H., Saygili, G., Glocker, B., Lelieveldt, B. & Staring, M., 2019, In : Medical Image Analysis. 56, p. 110-121 12 p.

    Research output: Contribution to journalArticleScientificpeer-review

  44. Rethinking Online Action Detection in Untrimmed Videos: A Novel Online Evaluation Protocol

    Baptista Ríos, M., Lopez-Sastre, R. J., Caba Heilbron, F., van Gemert, J. C., Acevedo-Rodriguez, F. J. & Maldonado-Bascon, S., 2019, In : IEEE Access. 8, p. 5139 - 5146 8 p.

    Research output: Contribution to journalArticleScientificpeer-review

  45. Robust Importance-Weighted Cross-Validation under Sample Selection Bias

    Kouw, W. M., Krijthe, J. H. & Loog, M., 2019, 2019 IEEE 29th International Workshop on Machine Learning for Signal Processing (MLSP). Piscataway: IEEE, p. 1-6 6 p. 8918731

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  46. Robust contour propagation using deep learning and image registration for online adaptive proton therapy of prostate cancer

    Elmahdy, M. S., Jagt, T., Zinkstok, R. T., Qiao, Y., Shahzad, R., Sokooti, H., Yousefi, S., Incrocci, L., Marijnen, C. A. M., Hoogeman, M. & Staring, M., 2019, In : Medical Physics. 46, 8, p. 3329-3343 15 p.

    Research output: Contribution to journalArticleScientificpeer-review

  47. Single shot active learning using pseudo annotators

    Yang, Y. & Loog, M., 2019, In : Pattern Recognition. 89, p. 22-31 10 p.

    Research output: Contribution to journalArticleScientificpeer-review

  48. The Instantaneous Accuracy: A Novel Metric for the Problem of Online Human Behaviour Recognition in Untrimmed Videos

    Baptista Ríos, M., Lopez-Sastre, R. J., Caba Heilbron, F. & van Gemert, J., 2019, (Accepted/In press) ICCV workshop on Human Behavior Understanding. p. 1-3 3 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  49. Towards automatic estimation of conversation floors within F-formations

    Raman, C. & Hung, H., 2019, 2019 8th International Conference on Affective Computing and Intelligent Interaction Workshops and Demos (ACIIW). IEEE, p. 175-181 7 p. 8925065

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  50. Using Phase Instead of Optical Flow for Action Recognition

    Hommos, O., Pintea, S. L., Mettes, P. S. M. & van Gemert, J. C., 2019, Computer Vision – ECCV 2018 Workshops, Proceedings. Leal-Taixé, L. & Roth, S. (eds.). part VI ed. Cham: Springer, p. 678-691 14 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11134 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  51. ViDeNN: Deep Blind Video Denoising

    Claus, M. & van Gemert, J., 2019, (Accepted/In press) CVPR workshop on NTIRE: New Trends in Image Restoration and Enhancement. p. 1-10 10 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

  52. Visual Content Analysis and Linked Data for Automatic Enrichment of Architecture-Related Images

    Mager, T., Khademi, S., Siebes, R., Hein, C., de Boer, V. & van Gemert, J., 2019, Digital Cultural Heritage. Kremers, H. (ed.). Cham, Switzerland: Springer, p. 279-293 15 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterScientific

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